LOCUS       AZN91041.1               839 aa    PRT              BCT 18-DEC-2018
DEFINITION  Pseudomonas aeruginosa fimbrial biogenesis outer membrane
            usher protein protein.
ACCESSION   CP032541-1042
PROTEIN_ID  AZN91041.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6264451)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the
            following genes: toxA, plcH, phzM, wapR, and aroA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6264451)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory,
            PO Box 1663 M888, Los Alamos, NM 87545, USA
COMMENT     Bacteria and source DNA available from Dr. Hongwei Yu.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-SEP-2018
            Assembly Method           :: Bowtie2 v. 2018-09-20
            Assembly Name             :: PGN5
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 217.64x
            Sequencing Technology     :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/26/2018 16:28:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,903
            CDS (total)                       :: 5,840
            Genes (coding)                    :: 5,779
            CDS (coding)                      :: 5,779
            Genes (RNA)                       :: 63
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            Pseudo Genes (ambiguous residues) :: 12 of 61
            Pseudo Genes (frameshifted)       :: 22 of 61
            Pseudo Genes (incomplete)         :: 18 of 61
            Pseudo Genes (internal stop)      :: 13 of 61
            Pseudo Genes (multiple problems)  :: 4 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PGN5"
                     /db_xref="taxon:287"
                     /country="USA: WV, Huntington"
                     /collection_date="21-Nov-2017"
                     /collected_by="Progenesis Technologies, LLC"
                     /identified_by="Progenesis Technologies, LLC"
                     /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-"
     protein         /locus_tag="PGN5_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_249685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MAIFRKKFDF EVSVYSRSSC LVALGLALPA VTFAVEFNAE FLNNEGGAPV ELKYFENGNS
       61 VSPGTYSVDI HLNQIMIRRE DVVFSADSET GSVRPVIRVG LLKEIGVDIA RLTRDKLIPA
      121 NLENNTPLNV AELIPGASVE FDVNSLSLLV SIPQLYVQRH SRGYVDPSLW DDGVTALFSN
      181 YQANFTRNTN FGQNSDYRYL GLRNGFNLFG WRLRNDSSLS GGTGMRNKFS SNRTYVERDI
      241 RALKGTLSLG ELYTSAQGDA FESVRMRGVQ LQSDIGMLPD NEISYTPVVR GIAETNATVE
      301 VSQNGFVIYS TNVPPGAFEI TDIYPSGSNG DLEVKIIEAD GRQRSFKQSY SYLPVMTRKG
      361 NLRYGLAAGE YHNDGQPSVN LLQGSAVYGL SDRVTGFGGL LAAEKYNATN LGLGFNTPLG
      421 GLSADVTHSQ SRTRRGGRNQ GQSLRLLYSK TINATETSFT VVGYRYSTEG YRTLSQHIDD
      481 MSDESYLYGS SSSRQKSRID LTVNQTLFRR SSLYLTAGET TYWNRPGSSR RVQFGFSSGI
      541 KRASYSLAVS RTQETGSFGR SDTQFTASVS IPLGGSARSS QVYANAVSSQ HGDSSLNTGI
      601 SGYLDEANAF NYSAQANYSK DGGNSGSVGL GWDTSKAKLS ANYSQGRDNK QINLGASGSV
      661 VVHPGGVTFG QPVGETFGLV EVPEVGGVGL DGYSSVRTDG RGYAVLPYMQ PYRYNWVNLD
      721 TNTLGSDTEI SDSTQMAVPT RGAVIAKRFS AESGRRVQFD LSMDSGGKIP FGAQAYDKEE
      781 RVVGMVDNLS RLLVFGIEDQ GRLSIRWSDG SCSVDYQLPP RNKDLTYERV ALSCRRSSI
//