LOCUS       AZN84864.1               647 aa    PRT              BCT 18-DEC-2018
DEFINITION  Pseudomonas aeruginosa autotransporter domain-containing
            protein protein.
ACCESSION   CP032540-347
PROTEIN_ID  AZN84864.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6264422)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the
            following genes: toxA, plcH, phzM, and wapR
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6264422)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory,
            PO Box 1663 M888, Los Alamos, NM 87545, USA
COMMENT     Bacteria and source DNA available from Dr. Hongwei Yu
            (yuh@marshall.edu).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-SEP-2018
            Assembly Method           :: Bowtie2 v. 2018-09-20
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 368.17x
            Sequencing Technology     :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/26/2018 12:47:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,631
            CDS (total)                       :: 5,568
            Genes (coding)                    :: 5,507
            CDS (coding)                      :: 5,507
            Genes (RNA)                       :: 63
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            Pseudo Genes (ambiguous residues) :: 13 of 61
            Pseudo Genes (frameshifted)       :: 21 of 61
            Pseudo Genes (incomplete)         :: 18 of 61
            Pseudo Genes (internal stop)      :: 13 of 61
            Pseudo Genes (multiple problems)  :: 4 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PGN4"
                     /isolation_source="derived from laboratory strain"
                     /db_xref="taxon:287"
                     /country="USA: WV, Huntington"
                     /collection_date="13-Sep-2014"
                     /collected_by="Progenesis Technologies, LLC"
                     /identified_by="Progenesis Technologies, LLC"
                     /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-"
     protein         /locus_tag="PGN4_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MFKPLAVAVG LGCAALSLGA NAYQYGEYAG ETLERLITDY PGRYRGTASF AGASKLMQSR
       61 LGFGYQTSRQ DFTWAGNRSS QNVIASAPGS SGKFLVLGAH YDTYYGRPTL QGLDDNASGA
      121 AVLTEIARNL GGIALENGLE VVGFGAEEEG LRGSRAYVES LDASQRANLL GMINLDSLVT
      181 GDKMYAHAGS NSVSNPALGA YREQILRIAR ELDIPLFTNP GLNAEYPAGT GCCSDGESFN
      241 GMDIPVLFIE ATNWELGDLD GYEQTDNPAI PGGSTWHDPA EDNKEVLTNA LGQERIEQRM
      301 RDFSRLLTRL VLEQTNADLL ASTASGGALA RQMEDQLQRQ HQALTRLHDR RWLTLLGSNR
      361 PVGSFDGEVG AEGEVSPDSG FDMPGNPESR RAGVHLLGDY RYSEALTLGG SLAFQRSRDK
      421 LDHGGRIEGD TWQLGLFGLY NDGGPEWLAG ELNLGHTRYD SKRSVYLQAA GGPVLLDQRL
      481 SGDTSAWSWG ARLEGGYDFS FGELRSGPLA GLDYMHYRID DFREDEALRT ALGYEKQDYD
      541 SLEASLGWRL RGELALGARM RLQPYASLRW VRELADGRLD DMDLTSRGDG RVRVADMGGV
      601 DKDFGRAQLG AQLAITEQLG VFAEANSRFA HSEGNQAGYS LGVNWQF
//