LOCUS       AZN84839.1               795 aa    PRT              BCT 18-DEC-2018
DEFINITION  Pseudomonas aeruginosa penicillin acylase family protein protein.
ACCESSION   CP032540-321
PROTEIN_ID  AZN84839.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6264422)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the
            following genes: toxA, plcH, phzM, and wapR
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6264422)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory,
            PO Box 1663 M888, Los Alamos, NM 87545, USA
COMMENT     Bacteria and source DNA available from Dr. Hongwei Yu
            (yuh@marshall.edu).
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-SEP-2018
            Assembly Method           :: Bowtie2 v. 2018-09-20
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 368.17x
            Sequencing Technology     :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/26/2018 12:47:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,631
            CDS (total)                       :: 5,568
            Genes (coding)                    :: 5,507
            CDS (coding)                      :: 5,507
            Genes (RNA)                       :: 63
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            Pseudo Genes (ambiguous residues) :: 13 of 61
            Pseudo Genes (frameshifted)       :: 21 of 61
            Pseudo Genes (incomplete)         :: 18 of 61
            Pseudo Genes (internal stop)      :: 13 of 61
            Pseudo Genes (multiple problems)  :: 4 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PGN4"
                     /isolation_source="derived from laboratory strain"
                     /db_xref="taxon:287"
                     /country="USA: WV, Huntington"
                     /collection_date="13-Sep-2014"
                     /collected_by="Progenesis Technologies, LLC"
                     /identified_by="Progenesis Technologies, LLC"
                     /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-"
     protein         /locus_tag="PGN4_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKRTLTVIAV AVAAAAAGGA WYLHAKQPLR NGSLALAHLQ APVDVRYDER GVPHLYAQNQ
       61 TDLYRALGYV HAQDRLFQME MLRRLARGEL AEVLGPKLVD TDRLFRTLRI RDHAAEYSAR
      121 QDKQSQPWKV LEAYLDGVNQ FQENNPAPLE FDLLGIPRRP FTPEDTLSIA GYMAYSFAAA
      181 FRTEPVLTYI RDELGSDYLR IFDLDWHPQG VLTPSGALGA GDWKDLGALA RLSQQALEDA
      241 GLPQFEGSNA WVVAGSRTAS GKPLLAGDPH IRFAAPAVWY EAQLSAPGFE LYGHHQALNP
      301 FASLGHNRAF GWSLTMFQND DLDLVAEKVN PDNPNQVWYQ GEWVDLQSEE QEIAVKGAAP
      361 VKLTLRRSPH GPIVNDALGA SSGKTPIAMW WAFLETENPV LDAFYQLNRA DTLAKARAAA
      421 SKIHSPGLNL VWANAAGDIG WWASAALPKR PEGVNPSFIL DGSKGEADKS GFYPFADNPQ
      481 EENPARGYIV SANFQPVPAN GRPIPGYYNL ADRGQWLDTQ LADRGTKWNL DNSRALQLGN
      541 RTGYAPRLLA PLLPVLREVV DDAEGKRLVE QLAAWNGDYP VDSTAATLFN QLLFQIAEGA
      601 LHDELGDAFF DSLIATRAID SALPRLAGDA DSPWWDDRRT ERRETRADIV RTAWNASLAH
      661 LRGTLGNDPS GWLWGKAHTL THEHALGQQA LLRRLLNVGP FAAPGTHEVP NNLSAKIGPA
      721 PWAVTYGPST RRLVDFADPT HSLGINPVGQ SGVPFDGHYD DQAEAYIEGH YLPQHYEENE
      781 VKANSKGVLV LEPKR
//