LOCUS ASM97924.1 4654 aa PRT BCT 14-AUG-2017 DEFINITION Vibrio vulnificus NBRC 15645 = ATCC 27562 RTX toxin protein. ACCESSION CP012882-65 PROTEIN_ID ASM97924.1 SOURCE Vibrio vulnificus NBRC 15645 = ATCC 27562 ORGANISM Vibrio vulnificus NBRC 15645 = ATCC 27562 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1741042) AUTHORS Rowe-Magnus,D. and Rusch,D.B. TITLE Direct Submission JOURNAL Submitted (06-OCT-2015) Biology, Indiana University, 1001 E. Third Street, Bloomington, IN 47405, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Celera Assembler v. 8.1 Genome Coverage :: 10x; 100x Sequencing Technology :: PacBio; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/06/2015 12:48:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,415 CDS :: 4,220 Pseudo Genes :: 45 rRNAs :: 12, 11, 11 (5S, 16S, 23S) complete rRNAs :: 12, 11, 11 (5S, 16S, 23S) tRNAs :: 115 ncRNA :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio vulnificus NBRC 15645 = ATCC 27562" /mol_type="genomic DNA" /strain="ATCC 27562" /type_material="type strain of Vibrio vulnificus" /db_xref="taxon:1219061" /chromosome="2" /country="USA" /collection_date="1979" protein /locus_tag="AOT11_00335" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_015727553.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKPVLYIEID GVLWKVMPDG QWVAVQADEV VDPTVKYVKE TPLPINDSDA VNIDDPIDAE 61 PVYQRPTTPN EAQSSDQDLA SESASLLGFI RPELREVLAQ SGYDTLPTDY ENTPERESPD 121 AQFYLLDDDA TITVTIADGG DGYENALEVP SIAIFGTTTD VEDGRIVQLV LSDASGQQQV 181 FSATVFQGEY RIEGIDASGF DEGTLTVTAT ITDELDNFIQ ASDTTIKDTL AEITTEFDGR 241 GDEFFNRFEI SSSGLTGTVS HVEDGQRIDI EVIDSLGQTL RFTTTVNGGT WSINEDLSSL 301 AEGPLTIHAQ TIDVAGNPAS ASDTIVKDTQ ASITVAIDSA DDDLVSDAES GNVRVYGEVT 361 NVEDGQAIRV VLVDSAGHAQ WFVTSVSGNQ WSIDNIDVSQ FADGDFRVLA MTKDVAGNPA 421 VATDSAGLDT TFPTIDIDTL TGLQIIDFKS GADTALQGTT SGAEAGQPVL VTITDGVNTV 481 EALTQVDAAG NWSFDSIDLS TLDANLEWQL NATVTDLAGN RASDGMPSLM VPDMVNVNED 541 IAVALGSSDA LSQINIDNAD FTFIDEQSSL SSLTSLGQSI SVVLSADGLS LSALRADGQV 601 VLSAHILNNQ EVKIQLFLPV DHGDTQRLLT ELMIQGTQTD SDGTSETVVA PVAVVIGDAI 661 VFPPLVDSAA ITVTIDDGGD GYENAQETPA VVIHGTTTDV ENLRLVTITV TDVDGNTLTF 721 TTRVENNRYQ ISPVDLTGLT EGPLSVEAHI DDVYGKTIQA TDSTIKDTLA DITAEFEGNG 781 DAFLNQFEVS KTVLTGRVTE VEDGQRIDIE VIDALGNTLT FSTLVAGNTW TIEADLSSLV 841 DGELTLNTET IDVAGNVTTA SDTIIKDTQA AITIAIDSGE DEALNPTELS SVTLSGVVSH 901 VEDGQAVQVV VTDASGAKLV FTTVVVSGAW SLTDLDLSSL TDGDIHATAS TIDVAGNPAT 961 AEDTAIVDTT APTIDIDTLT GLGIVQFKQG TETALQGSTT GAEPGQPVVV TISDGTQTIS 1021 VTTTVDASGL WSFSSIDVSA LDAAKSWTLT ATVTDAAGNS ASDETPTLDI PDTVSLWEDI 1081 SVILDSSEAL SDINIDNAQF TFHDTQSDLA ALTSLGQSVS VVISTDGLSL SLVRGDGATV 1141 LTAAIETNSQ VKLSLFLPVD HGEAQRLLTQ ILLEGTQTDA DGTTETVIAP LPIVIEDSIV 1201 FPPLVDSASL TVTIDDGGDG YENALEVPGT RIHGNTVDVQ DLRLVTITVT DSLGATLTFT 1261 TRVENNQYQF FPVDLSSLAE GPLTVEAEIH DAYGNVITAN DATIKDTLAE MDVAFDGQGD 1321 AFLNQFEVAT TMLNGHVANV EDGQTINVEI IDGQGGRLTF TTVVSGEQWS LEVDLSTLSD 1381 GELTVHAQTL DVAGNPTTSH HTIVKDTQAS ITVEIESGDD DLLNPEELTS VKIGGLVSHI 1441 EDGQSVNVVL SDSAGNTMTL QTTIVGGAWA IENLDLSGFV DGEISATVST VDVAGNPATA 1501 TDSATVDTTA PTIDIDTLDG LNILQFKLGT STALQGTTTG AEVGQPVVVT ISDGTQSISV 1561 TTSVDAAGNW QFAAIDVSDL NNRATWTLTA TVTDAAGNSA VDDMPTLTFP DVVTVYEDLT 1621 VAIGSSGATS DINVEQAQFR FHDVQTDLES LTSFGQSITT TLSADGLTLT AIRADGEILL 1681 TAHIASNAQV QLQLFLPVDH GDSQRLLTDL MIAGTQTDAD GTTETVLTPL PIVIEDAIVF 1741 PPLVDSAEIT VVIDDGGDGY ENQFEVPAVR IHGNTVDVEN LRLVTITVTD VDGKVLTFTT 1801 RVSDNAYQVS PVDLSSLAEG PLMVEAEIHD VYGHSVSASD STIKDTLAEI STDFQGNGDE 1861 FFNKAEITTS GIAGTVSNVE DGQRIDIEVI DHLGHRLTFT TTVSGNSWSI SEDLSALAEG 1921 ELIVNTQTID VAGNPTVDTD TIVKDTRAVI SVNVASGSDA LLNATEVTAT DLFGRVFFVE 1981 EGQTVSVTVT DQAGKVLTFS STVVNGRWEV ADADLSSLAD GPIVVTASVS DVAGNVATAS 2041 DSLHVIDTLP PQIDIDTLDG LSVVDFRSGS LTTLQGTTSA EENQTVTVTI TDGTNTLTYT 2101 TLVDVSGSWT INGVDIASLD QNAEWQIQAD VTDLAGNPAT DTMPTVIYPD GAVFIEALVG 2161 ILGQQNATVD LNIQFGDFAF HADQSAFTEL TSQGQAITIA ISTDGLSLTA TRTDGAQVLT 2221 AEIVDDQVKI SLKKPLDEIR DLDSTHTSLL IQATQTDTDG TSETVVAPVS IVVLDSQPIS 2281 FDDHYLTTEG HNEFGNLLAN DFDLDAPLLV KSIFINGETH VVSQSAPLSL VLPEGILTIY 2341 SDGRWTMAVS RDLDHSQSQQ VTFSYIAGDK NYDYDSANVV IDIHDGEAGR IEPGSQTLTE 2401 NLLSDGAQVV TTSITVTGGS DNPDANSLRF DEKALADFES LNLTSGESLL TLSYQLSSDG 2461 KTISATAHNG DVIFTLTLSD AAISGSDVNA SLTLTLNRPI NQYNGDDVTR LPVTITGTDS 2521 DGTALISGDF VWRIEDGTNP TLSNANGVFL NEEGLLTQSS ISDSGSVNVA VGSDPIGSLY 2581 FELAGQPTLT SGGEEISYVV SPDGNTLQAY VGDLNHLVFE VRIQEPNAEN NSLINYDFIL 2641 YRALDQHDED EIDAIPLVIT IRDTDGDIQR LPLDIEIQDG HQGELTSATL VVTELPKDNL 2701 IPAGITSEAS VNLVVSADTD PIVAVTLSVS NGQAVVDRNN NALTHNGEAL VWRVNGDGSY 2761 DAILSDGTAV FSVQLPDGVN FAPDSTNQVT LSVHLYLPVD HSKLTNDKQL SVALPVTATD 2821 TDGTSVTSNS TLIIFDGETP TLSVAGQVVV DEHGITDDGI ASGSETVTHV LNVDGGSDDV 2881 ADIQIDIAAF NAQGFTSGGL AITLYAQNSN GWFVAKSSDG EVVFKIRPNN NGKVDFVLSG 2941 ALDHPDGNGT NLLDLPFDMW VIDADGDISS TETLTVTVTD DVPIAQNTSV ELVEGDSYTT 3001 NLLPESVMGA DGAEISSVTY RGTTYPLSAD GTPVTIQLVN PNVPSEVYGS LVVHQDGTFE 3061 LTTNPNVTTV PAISDTVSYV VIDGDGDQVT STATLVLDDT AGILRVDDVE MREDEQGTLS 3121 IVVALGDRDQ GETVDSIEID ANSLQGGTLY LDGVALNAVG GKVILSGSQL LMIGNQVTVS 3181 GALTYQPATH LASNTATIVL AVSAIIASTT GSETLADTIN VNVFPVADVP TWQADSQYDY 3241 TLVEDASEPL LLTLNADLVD SDSSESLSYL ISGIPAGITV WLDGSQVNET TAYSEEELNR 3301 MTIRSDTNIS GQFTFTVTAV ATEAGSSFAS PSDQTAVASQ QVTINVRPDA DTPSLSVKNI 3361 AGLEDQPLNL HDAIKGHLTD SDGSETLYYK LEVAEGWSVE GGSSLRLEDG TYWFSDAELV 3421 AGHIYLIPKE DISSVTETLT VKVTAVSLES TVDGLVPVTP TANSSTETIT IRLTGVVDEP 3481 HAIDGGAGHW GYDAESKVIS NQTDFIEDQL IPLDFELITS DDDGSEVINI LITGIPDGVM 3541 LVDASGQPVS LPISGEDPTT GIIYQVTNSD LANLYLKVPE DYSGQLQLSL KVISTEPDGD 3601 SGEFPMTVDI EIKPQVDQNS GSIISSLGVE DNRVPLSLWP SLGADNDGSE EVIGYVINAP 3661 EQGITLYFDG VEITIPTGGL DVASLTDSLS PDLESLLNSG RLTAKGPMDF SGTLDIPVTY 3721 LVQDTSGTGA IDQKYVDATI AVNFDARVEL DTRLEGNPRV LANSEGGAVD LTYAVRFVDM 3781 DVDGSEYLDY IVIKVPTGLT LIVDHPNGAT QDGEGNWVIP AHGLTSDSVR ELAALILKDA 3841 TISSTQNTEI INLVVSARVI DGEDARFIDA PIRVQFTGHD DGGGSCEPVG PPGDLTPGDD 3901 ALQFNEGEDL DLSGLLDGNI GSDPNNELSF FISADKLPDG VMIEGEGVTI EYDSAGNIVG 3961 FVIPPEAMAS LKITGLDEDF AGCLSLEVDI KETSGCNGDS VTTTQAIDIE ILPIVDDMLV 4021 SSVTTMDEDG VTDLNLSLIL GDSVEAGQTI SGEGNSATGK ETINSLMIKV PSGVTLVETP 4081 ADTGLLTDNG DGTYTINDAT RLGDISLVPP AHYSGDIRLE VHANITDAAD CVAQTDTQDK 4141 VSIITIHIDP VTDAANINAS NVLGDEDSYI ALSGLDVSLI DQDGSETLSV MIKGVPDGAV 4201 LVYKVGASYE LLPNNGADGG SFDGMPSSEW QLDPSRLADL YILPPLDFSG DIPLTINAIT 4261 QEIGTTDIVH TSGSMTVGVL PVGDDVQFFG LDSQYTGMEG EALSIPVTIS SNETNSDEFI 4321 VLTLHAELTS DPSALSGLDK IIVDGHEASF NQHGDGSWVA RVIVRASEVG NIQLYSGDAF 4381 GTLNLTMTAQ TFDKSIVLGS LATDLGEAQT QSIVVELAPV PDEPILTLDY VTIVAEASGS 4441 IPLNLDMSMV NPADGEEGYL TISGLPDGLL LSAGSKESGE WLVPVNDVAN LSIVSGYTGA 4501 ESFTLTLTPS AQLGGQTATG LSQVLDVQLL AIGDSSLTAT SGDDLFVFNS DSLGSVGDAT 4561 VDTIAGFDMS ANSDTIDLSA ILSGLGVSDG ASADPFVDLV QTGTDLHINI KTDGVNAVQT 4621 IVLTDLNLED YYGAGLTEAQ ILQQMIDDQN LIVQ //