LOCUS       ASD28567.1               668 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta hybrid sensor histidine kinase/
            response regulator protein.
ACCESSION   CP021995-2459
PROTEIN_ID  ASD28567.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017505644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MAVGFALAIA AIAYPAFRAS AFTAPGLILI FAAGATALIW LSAFGRSERR SPSGDTAVEM
       61 LDAMAEPAAL VQPSGQVLAY NAAWAEENGT VTTLPRAGKG GGKSAQALYM AFAQAREGHQ
      121 GRAIVQIGAR EIEVLIGHAG QGRFLVRAAP EAVLPLAPSA PAAPQPAAPT GEARAMAAGA
      181 PFGSAVIGGE DLFAGRVEEP NAALALLTGP AASGDAAFGH LFDPAGVAEA RTKLEAGSSG
      241 PIELIARAHP DRQLHLYVAP EGDRRRVWLF DVAAQKSMEL QLSQAQKMQA VGQLAGGVAH
      301 DFNNLLTAIQ LQLSGLLERH PVGDPSYEGL NEIRQTAIRA ADLVRKLLAF SRKSTVRRER
      361 LDLGELVGEF AVLLRRLLRE DVRLETDYGR DLPLVLADKS QLETAVMNLA VNARDAMRGV
      421 VEPGAGVVTI KTRRLTGAQA RDMGWREATD EVALIEVSDT GPGVPTALLD KIFEPFFTTK
      481 AVNEGTGMGL ATVYGIAQQA GGHITVANLD GAGAAFRIFL PAATAEELVE APVVEKVVKA
      541 PRDLSGAGRI LFVEDEAAVR GIAARLLRQR GYEVIEAADG EEALILAEEW AGQIDMLISD
      601 VIMPGLDGPS LLRKARPFLG DAPVMFISGY AESDFSDLLQ DEVGVSFLPK PLDIKTLAER
      661 VKQELHAG
//