LOCUS       ASD28229.1               543 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta long-chain fatty acid--CoA ligase protein.
ACCESSION   CP021995-3101
PROTEIN_ID  ASD28229.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_15800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003166979.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLGMMQDWPL TVDKILDHAK NWHGEREVVT RSVEGPIVRT NYAAIHERAR RVSNALLAWG
       61 IKPGDRVATL AWNTGNHIET WYGIMGIGAV CHTLNPRLFP EQLAYIINHA EDRILFTDLT
      121 FVPLLEAVLP HCPTVERVIV MTDAAHMPQA KLPRAEAYET VLEQSSSDVT WGGFDEQTAC
      181 GLCYTSGTTG NPKGVLYSHR SNFIHTLLGM QATVVGGTPS EVILPVVPMF HANAWGIAFV
      241 GPAAGSKLVM PGAKMDGASI YELIETEGVT FSAAVPTVWQ GLFGHMVENN LKFSTLRKVL
      301 IGGSACPEAL IRGFQDKFGV EVVHAWGMTE TSPIGTIANL TPELKALPYD QQMAWRMKQG
      361 TPPLGVELKI KNYGGQDMPH DGKTYGRVMV KGPTIAGAYF KGEGGDILDH EGFFDTGDIA
      421 SVDSHGFMQI TDRAKDVIKS GGEWISSIDI ENIAVGHPKV ALAAVIGAAH PKWDERPVLL
      481 VKLKEGEAEN KQEHLDFLQG KIAKWWMPDD VVFVDDIPLG ATGKIDKKTL RERMKDYQLP
      541 AAG
//