LOCUS       ASD28029.1               790 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta hypothetical protein protein.
ACCESSION   CP021995-2886
PROTEIN_ID  ASD28029.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_14695"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /transl_table=11
BEGIN
        1 MKDNIDFNRA LFRGATTETV SVLMKNGSRV RRKYVKASAY PSEIAAIIAA NPNDNIFVGL
       61 GLLPNEPVNG RGTSEDVATM VGFYIDLDMP RSDGSRYDGR AERGVSLDEI LEAFTEIGLA
      121 PTAVTNTGNG SHVYLLLNEP FFIATDDDRR RVAETFRGVS QYVKEKVAAK GWKTDITADL
      181 ARLDRAVGSN NVKDFANPKP VTVDFLDDTQ RYGLDYLTSL APRPPVTVTA LRSVPDPNVD
      241 GADKNLGDFD AILASCAFMR HCVDHPAQLS EPEWRALIGT LAFCVDGRRL AHAYSEGHPN
      301 YSVEETDRMF SRVSEEAGPP TYDYIRSILR SFEPDESFAL YGTVVAPISL GYMEPDVARL
      361 VGRYAYVIAE DRFVAFDTFE TRSTKAFDAE NLHLKGLTAP SRDFLKSPRA IKAARRDYLP
      421 GRDRLVTSDD RGLILNSYRQ SGVTPKAGAW PYIQQHFETV FPEEQDRNAI YDRFAMAVQQ
      481 PGQKIKSAVM IFGPEGGGKG TILELLIKAI GRENAVTLPS AAIADAFQDD RVNKQLVIFN
      541 EVSGVGRSEV NSLKELITEE FIMVQGKGIP RYRGRTPSQV FVTTNDDAAM QINSSDRRWL
      601 VLETPVAPPP QGHFDALYAA IPEELPAFVH AMATRDISGF NPHARPQVTT AKEHMIRSAA
      661 SPLEYAIREA MEAEVGVFAS DFGTAEEVIR AVMTNGWSGR SPHSRSVGSI LSNMGMATMG
      721 RFTLPNGTKP YFHAWRNKEH WLQADRATVL AHRSYQITSA EIIQLHPAAN GILQDADQAI
      781 DQGRTARLQD
//