LOCUS       ASD26882.1               734 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta S9 family peptidase protein.
ACCESSION   CP021995-1624
PROTEIN_ID  ASD26882.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003166509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MMKSLLLSVA LPALMLAAAP ALAESVASDP AAASATNPPP HFPRDLSPEG VKAADDHLAL
       61 EEVDGAEARA FVAASNEKAL AALTGDRRYE PFRQQAEAIL TATDRIPGVS FLGEGLGNFW
      121 QDAANPKGVW RRTTLASYRT AQPQWETLLD IDALAKAEGK DWVFKGANCL APDETRCLIS
      181 LSDGGKDAVT VREFDLTTKR FVDGGFVIPE GKHRISWLNR DTLLIATDFG PGSLTESGYP
      241 FIVKSLTRGH PLAHATEVYR GEQGDGGYGV SPMVFRDKAG AVEAVLFSRP LDTFRSEIWA
      301 LGSDGKPYRL NLPERVGVQG VLGGKLIFSP EQAWSFDGQD YAAGSLVAMP MGVLGDVRQS
      361 IRIDAKTGTI FAPGARQSLQ NVSVFEDSIV AVIADNVVGT LKRFVPTADG WTATDIAVPA
      421 NSAVGLGDSS KAKGQVFVST QGFLTPPTLS LADVATGALS ELKSAPAKFD ASTHVVEQFE
      481 ATSTDGTKIP YFVTRPKNLA MDGTGPTILF GYGGFQASFP PAYKPEMGKL WLENGGVFVQ
      541 ANIRGGGEFG PGWHQAALRE NRQRAFDDFA AVARDLEQRR ITSPRHLGIY GRSNGGVLTS
      601 VSITQHPELF NAAVIESPLI DMLRYQELPA GASWMGEYGD PRIPGDAEFI ARYSAYQQLR
      661 PEVKYPRVYI TTNTRDDRVH PGHARKFAAR LGDLGHDHLY FEDTAGGHSN DADPVANARR
      721 WARHYVYLAQ QLMD
//