LOCUS       ARV73842.1               624 aa    PRT              BCT 02-JUN-2017
DEFINITION  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ligand-
            gated channel protein.
ACCESSION   CP015863-2780
PROTEIN_ID  ARV73842.1
SOURCE      Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
  ORGANISM  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Complete genome of Vibrio campbellii type strain (ATCC 25920; CAIM
            519T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2016) Center for Bio/Molecular Science &
            Engineering, Code 6900, Naval Research Laboratory, 4555 Overlook
            Avenue, SW, Washington, DC 20375, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SMRT Analysis v. 2.3.0 HGAP.2
            Reference-guided Assembly :: CP006605.1
            Genome Coverage           :: 23x
            Sequencing Technology     :: PacBio RS II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/25/2016 17:47:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,754
            CDS (total)                       :: 4,578
            Genes (coding)                    :: 4,479
            CDS (coding)                      :: 4,479
            Genes (RNA)                       :: 176
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 134
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 51 of 99
            Pseudo Genes (incomplete)         :: 31 of 99
            Pseudo Genes (internal stop)      :: 40 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC
                     25920"
                     /mol_type="genomic DNA"
                     /strain="ATCC 25920, CAIM 519T"
                     /isolation_source="Ocean"
                     /db_xref="taxon:1224742"
                     /chromosome="1"
                     /country="USA: Hawaii"
     protein         /locus_tag="A8140_14680"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_017187951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MRKTFLAITC ASLLSPTFYL QAQEASADET VVVTANRFQQ IDGAVLAQTV TVTKEDIERL
       61 QANSLFDVFL TLPSVEVAQY GGRGQSASIY VRGGSPSQVL VLVDGVRMSR AIMGGVDFNQ
      121 FPINSIERID YIRGARASIY GSEAISGVIN IITRANIDSD ASHVTAGYGS DNHKKGTFFV
      181 SKPVGDGKHF KGVLGYEKTD GFNVKPLPGV NDGDEHGFET LNLKLGYQQN FSDNLSGYVG
      241 VSAYNNEYDY DNSSYGNPAW GTVDKHEKKT GEVEYVGADL SLEYNKDVYS SELKLAYGQQ
      301 DNYDHKSGQS KSTGDHVAIE QFNAIWLNSY SVNEELSVGG GLDYRTEKLS KGYIAPSDWG
      361 PSQSYDPEKN PRTNFGISAI AQYAYDVWTL EASVRNDDNT QFGNNTTWQT AAGWSFYEGY
      421 ELTLSHGTAF RAPSFVDLYY PGYEMPNLKP EESENTELSL SGAVSIVDWT VTGYYNEIEN
      481 MLIWEGAGMQ NVGEAEIKGV ELEVKLDTDI VSHEFYLDYK DPVDKSGAED TQLAYRSKRG
      541 AKWNAYATFD QWTLGSQYLY QGERFNGSTR LPSYSLWNFT ASYAVNQNWD INAKLSNAFD
      601 KDYEMYVGYA TPGRQYFVSA DYRF
//