LOCUS       ARV72445.1               642 aa    PRT              BCT 02-JUN-2017
DEFINITION  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 threonine-
            -tRNA ligase protein.
ACCESSION   CP015863-1298
PROTEIN_ID  ARV72445.1
SOURCE      Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
  ORGANISM  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Complete genome of Vibrio campbellii type strain (ATCC 25920; CAIM
            519T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2016) Center for Bio/Molecular Science &
            Engineering, Code 6900, Naval Research Laboratory, 4555 Overlook
            Avenue, SW, Washington, DC 20375, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SMRT Analysis v. 2.3.0 HGAP.2
            Reference-guided Assembly :: CP006605.1
            Genome Coverage           :: 23x
            Sequencing Technology     :: PacBio RS II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/25/2016 17:47:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,754
            CDS (total)                       :: 4,578
            Genes (coding)                    :: 4,479
            CDS (coding)                      :: 4,479
            Genes (RNA)                       :: 176
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 134
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 51 of 99
            Pseudo Genes (incomplete)         :: 31 of 99
            Pseudo Genes (internal stop)      :: 40 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC
                     25920"
                     /mol_type="genomic DNA"
                     /strain="ATCC 25920, CAIM 519T"
                     /isolation_source="Ocean"
                     /db_xref="taxon:1224742"
                     /chromosome="1"
                     /country="USA: Hawaii"
     protein         /locus_tag="A8140_06820"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_010319593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPIITLPDGS QRQFDNPVST MEVAQSIGPG LAKATIAGRV NGNRVDACDL IEEDASLEII
       61 TVKDEVDGLE IVRHSCAHLL GHALKQLYPQ AKMAIGPTID NGFYYDIDLD ESLTQDDLEK
      121 IEKRMKELAK TKYEVVKKKV SWQEARDTFE SRGEPYKVEI LDENVSRDDR PGLYHHEEYI
      181 DMCRGPHVPN MGFCQHFTLM NVAGAYWRGN SDNKMLQRIY GTAFHDKKAL KAHLTRLEEA
      241 AKRDHRKLGK QLDLFHMQQE APGMVFWHHN GWSIFRDLEV FVRSKLDEYG YQEVKGPLIM
      301 DRVLWERSGH WDKYADAMFT TSSENREYAL KPMNCPGHVQ IFNQGLKSYR DLPLRMAEFG
      361 SCHRNEPSGA LHGIMRVRGF TQDDAHIFCT ESQIQEEVTN CIKMVYGTYQ TFGFDNIVVK
      421 LSTRPEKRVG SDEIWDQSEE ALKQSLESME IPYEIQEGEG AFYGPKIEFT LYDCLDRAWQ
      481 CGTVQLDFNL PGRLGATYVG ENNERLVPVM IHRAILGSLE RFIGILIEEY AGFFPTWLAP
      541 EQAILMNITD KQSDYVQEVV QKLQKSGIRA KADLRNEKIG FKIREHTLKR VPYMLVVGDQ
      601 EMEAGEIAVR TRKGKDLGKF KVDDFIAYIQ DEISSRKLNL EE
//