LOCUS       ARV72127.1               252 aa    PRT              BCT 02-JUN-2017
DEFINITION  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 3-
            deoxy-manno-octulosonate cytidylyltransferase protein.
ACCESSION   CP015863-969
PROTEIN_ID  ARV72127.1
SOURCE      Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
  ORGANISM  Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Complete genome of Vibrio campbellii type strain (ATCC 25920; CAIM
            519T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3253249)
  AUTHORS   Wang,Z. and Vora,G.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2016) Center for Bio/Molecular Science &
            Engineering, Code 6900, Naval Research Laboratory, 4555 Overlook
            Avenue, SW, Washington, DC 20375, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SMRT Analysis v. 2.3.0 HGAP.2
            Reference-guided Assembly :: CP006605.1
            Genome Coverage           :: 23x
            Sequencing Technology     :: PacBio RS II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/25/2016 17:47:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,754
            CDS (total)                       :: 4,578
            Genes (coding)                    :: 4,479
            CDS (coding)                      :: 4,479
            Genes (RNA)                       :: 176
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 134
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 51 of 99
            Pseudo Genes (incomplete)         :: 31 of 99
            Pseudo Genes (internal stop)      :: 40 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC
                     25920"
                     /mol_type="genomic DNA"
                     /strain="ATCC 25920, CAIM 519T"
                     /isolation_source="Ocean"
                     /db_xref="taxon:1224742"
                     /chromosome="1"
                     /country="USA: Hawaii"
     protein         /locus_tag="A8140_05170"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_005431695.1"
                     /note="CMP-2-keto-3-deoxyoctulosonic acid synthetase;
                     catalyzes the formation of
                     CMP-3-deoxy-D-manno-octulosonate from CTP and
                     3-deoxy-D-manno-octulosonate which is incorporated into
                     LPS; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSFTVVIPAR YASSRLPGKP LADIGGKPMI QWVYEQALQA GAEDVIIATD DERVSAAAEQ
       61 FGGKVCMTSP NHESGTERLA EVVEKMAIPV DHIVVNVQGD EPLIPPSIIR QVADNLAGCD
      121 APIATLAVEI ESEEEVFNPN AVKVVADERG YAMYFSRATI PWDRDNFAKQ DKTIANPLMR
      181 HIGIYAYRAG FINTYVNWQP SALEQIECLE QLRVLWYGEK IHVEVAKEAP AAGVDTPEDL
      241 EAVRAIVAKQ AQ
//