LOCUS       APA94318.1               469 aa    PRT              BCT 30-JAN-2018
DEFINITION  Nocardia seriolae HTH-type transcriptional regulator RamB protein.
ACCESSION   CP017839-227
PROTEIN_ID  APA94318.1
SOURCE      Nocardia seriolae
  ORGANISM  Nocardia seriolae
            Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
            Nocardia.
REFERENCE   1  (bases 1 to 8304518)
  AUTHORS   Han,H.-J.
  TITLE     Genome sequence of Nocardia seriolae strain EM150506, isolated from
            Anguila japonica
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8304518)
  AUTHORS   Han,H.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2016) Pathology Research Division, National
            Institute of Fisheries Science, #216, Gijanghaean-ro, Gijang-eup,
            Gijang-gun, Busan 46083, South Korea
COMMENT     DNA/bacteria available from National Institute of Fisheries Science
            (NIFS) in South Korea.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SMRT analysis v. 2.3.0
            Genome Coverage       :: 156x
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nocardia seriolae"
                     /mol_type="genomic DNA"
                     /strain="EM150506"
                     /host="Anguilla japonica"
                     /db_xref="taxon:37332"
                     /country="South Korea"
                     /collection_date="2015-05-06"
     protein         /locus_tag="NS506_00231"
                     /function="DNA-binding; Repressor; Transcription;
                     Transcription regulation."
                     /note="During growth on glucose, RamB negatively controls
                     the expression of aceA, aceB, ack and pta genes which are
                     involved in acetate metabolism (PubMed:15090522,
                     PubMed:17114251). RamB is also a negative regulator of
                     rpf2 gene expression during growth on acetate as the sole
                     carbon source (PubMed:18355281); Belongs to the
                     short-chain fatty acyl-CoA assimilation regulator (ScfR)
                     family; Contains 1 HTH cro/C1-type DNA-binding domain"
                     /transl_table=11
                     /db_xref="UniProtKB/Swiss-Prot:Q8NTD8"
BEGIN
        1 MAKTYVGARL RQLRTERGLS QVSLAKKLEI SASYLNQIEH DVRPLTVPVL LRISEVFGVD
       61 AGFFSSQDDT RLIAELQEVV MDQELGVEAD AQEIAEMVSA HPGLARAMVN MHRRYRNTTA
      121 QLAAATEDRF ADGSGSAAIS KPHEEVRDYF YQRQNYIHEL DTAAEELTHR MRFHGGDLKR
      181 EIPRRLADAH GVQIVERIDL GDGLLHRFDP EQRRLEIAPH LSGGQRVFKL AAELAYLECG
      241 DLIEKLVAEG NFSGHDSVVL AKLGLANYFA AATVLPYSHF HEVAEDFRYD IERLSAFFTQ
      301 SYETICHRLS TLQRPKLRGV PFSFVRVDRA GNMSKRQSAT GFHFSSSGGT CPLWNVYETF
      361 AYPAKIMTQI AQMPDGRKYL WVARTVERRA TRYGEPSKTF AIGLGCELRH AGRTVYADGL
      421 DLNEPKATPI GAGCRVCERS SCPQRAFPPL GKTLDISEHR SSISPYVIQ
//