LOCUS       ALR14536.1               481 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 protease
            TldD protein.
ACCESSION   CP009977-62
PROTEIN_ID  ALR14536.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /gene="tldD"
                     /locus_tag="PN96_00425"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_005461834.1"
                     /note="responsible for the proteolytic maturation of the
                     E. coli pMccB17 plasmid-encoded microcin B17, an exported
                     protein that targets the essential topoisomerase II DNA
                     gyrase; degrades the E. coli plasmid F-encoded CcdA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSTNQIEQAL IAPNGLTEQD IADTLASIAT RQIDYADIYF QSSWHESLVL EDSIIKDGSF
       61 NIDCGVGVRA VTGEKTGFAY SDQINLDGLK QSAIAARGIA QQGQNGKVQA FKRTDNQAYY
      121 EAVNPLAGWE KQQKTELLKS LDAYIRTKEP LIKEVSISIS GVHEQMLVAA TDGTYAGDIR
      181 PLVRLSISVL AQKGERRERG SAGGGGRFGY DFFLSETDGV KQAFHYADEA IRMALVNLEA
      241 EAAPAGMMPV VLGSGWPGVL LHEAVGHGLE GDFNRKESSV FSGKMGQQVT SSLCTIVDDG
      301 TLKDLRGSLN VDDEGVNGQY NTLIENGVLK GYMQDKLNAR LMGVNPTGNG RRESYAHLPM
      361 PRMTNTYMLP GEHTPEEIIS TVEKGLYAPN FGGGQVDITS GKFVFSASEA YLIENGKITR
      421 PVKGATLIGS GIEAMQQVSM VGNDLSIDKG VGVCGKAGQS VPVGVGQPTL KLDSLTVGGT
      481 E
//