LOCUS AKO89879.1 4180 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 hemagglutinin protein. ACCESSION CP012001-4370 PROTEIN_ID AKO89879.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_22160" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003147216.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPSRSPSSAR SSRALYAPRL KPLAQAIALL LVAGGAQAAG QPFSAAWFAA KGAAQGGAAG 61 APRPGAQLPG APPPLAQQQR VNQQLQRSMA NLNNTVAAIA AQQAAQAAGR QAALNLPQDV 121 PDGLGEGGLK VDASLPFEQA WQNAKGPVQT QAAGKTTVSI EQTADKAVLN WETFNVGRNT 181 TVDFQQHADW ALLNRVNDPS ARPSQIQGQI KADGTVMLVN RNGVVFSGSS QVDVRNLTVA 241 AANISDEQFR QRGLYYDNAG SRPTFTDAAG AVRVEQGAQL RTAAPSGSTR GGGYVLLLGS 301 EVDNAGSIVT PKGQTVLSAG DSFVIRRGQG TDGNLTSTTR GNEVLPGFAA DSSAGRVRNS 361 GLVQAATGDI SLSGREVEQA GVLLSSSSVD SRGTLHLKAS ERITLAEGAT SAILVDSSGS 421 AALDSQREAL LKPLNGSSAA VSRGDDDRRD LSRVEIDSAG SVDFRDGSIT LASGGQVAVN 481 AGQRALLRDG AVIDVSGAQG VQVAMETNNI KVNVRGNEQR DASVNREGGG LNSQDVWVDV 541 RDLVRVPAGT NGYASDRWYT AGGLLEVGGY LGTQGHSAGE WMAQGGIVSF TGNDVVTQAG 601 SQINLSGGTL DVQGGYIRQT WLKGSDGRLY ELGSAPGDLL YDGIYRGYEA HSERWDQTRY 661 FYNPLIAPTQ RYESGYSVGR DAGSLVIGSA NARLDGQVVG DTYRGERQTE APQAGLDGYN 721 QSQNAVARGA QLVVGRYTPY YVKSSGLLEY ALGADAGSLK QVVIGAGEVA AEEPTLDAPV 781 AAERQGRLSL DSELLNGFQL GGLKVAAGES IRVDSALTLA NGGEAILFAN DVAIDADITA 841 HGGSLQAGNV LAQISPNGTI DGFVDAGREA GILRVGDGVR LDASGLWSNL LLAPEDNDTL 901 AYRDGGRISL RSGGDLSLGQ GSLLDVSSGA ALLADGKRLG GRGGDIALHA SAGLAQASDG 961 QLQLGGTLNG LGTSGAGTLS LQSGKVRIGG GDLGDGSLQL AEDFFQQGFA SYRVVGRSGL 1021 RVAEDAQVRV ARPVYRFASG AGEVAAGEAP REALEAWIPP LYLEDALAGR LVQREGADLY 1081 LQAGGDGNIL GQLDPASQTL ELGRGSLVEV DPGRAIVLRG PGQITLDGIL NAWGGRIDVR 1141 QQQFGALDVT QDNQPKAQGQ PHARSIWIGE QALLDVAGRA VTALDGRGRR YGEVQSGGSI 1201 VIGGEIDPGK AIATSADAFV IVRPGARLEA SGSQAQLDVP GLGRVLLAGD GGRIALSSYN 1261 GLYLDGSLRA AAGGSGAAGG SLEIIADAPL YQGFTVVDDR VLAMRELILT AGHADSGLPT 1321 LLQPGMDDSA LRYGQSRVGT QSLTGGGFDQ LSLFSNGPLS FEGNIDLAMG RSLNLYAGTI 1381 AATGGGPSEV KLQAPYVRLS GIGMYGQQAS GEFRPRLTYG PTATAEQVRL QVSAGRLLDI 1441 AGRLSFGSDG VINGVNAEAV RYQRPGFEKV TLRSEGDLRF AGDYPENGDP SGRLITHGDL 1501 QLTAAQLYPV TGASSTLYAG YGLDEGGQAV FDAERHLAIE RSGESLPDTP LSVFGSLAFM 1561 ASNIEQGGVV RAPLGLIQFG SNLDRAPGTV RLLPGSLTSV SGAELVMPYG GTTDGINYLV 1621 NQVPIQLTGA GGALAAGTLV AGVGLYASEV DVQQGARLDL SGGGELAGAG FISGRGGSTD 1681 ARFHPLVQQD NDGFRLPELS SNPVYAIVPG HQAVSAPLGG EAGAIQPLVG QQVTIGDGVP 1741 GLAAGTYTLL PSTYALLPGA FRVEINGLAG QGAPMATQGL RNGSWATSGQ LSIAGTSIRD 1801 SLSRQVILSS ADTLRRYSQY NEMSYADFIR ADAARKNIPR AMLPVDARSL YLGLRADEEL 1861 RENALSFEGK VDFTPEESGY GGSLIVDAEA GIEILPEGGL PDSDFAGVSL VADDLNAIGA 1921 SRIAIGTLPY VEYGEQGNFV QFGGSNRLFP VVLRKGAHLS APEVIIGRDI TLEGGSGIST 1981 LGKGKTAYDS SDGFIYQPGG RNLLLLSNGW LNLLAPAADS SLPVRLGGCA EGAGCADTEL 2041 YSEGTLGIAT NGTVTFGDNV RYGTRNLSLA LSTINIGSSQ SLADAAARGV LPNGLALDQT 2101 VLQRLLRGER GAGIPALENL ILSARDAVNI YGSVSLDTYD PATGKSSLAN LVLGTPAIYG 2161 HGTGEDVASI RTASLVWSGS SQPAAAPVAG GAGSGSGTLR VDAERITLGY GANTQPAGET 2221 DEARLALGFA EVQLNASERI SANHKGSLRV YQRLDGYVAG EGLRYSGGDL RLSTPLLTGE 2281 AGSLSRISSG GSLSLAAPAG AAAVTFDSGT AGLGAELSLS AREIRLDSAV SLPSGKLSLS 2341 AEDDLELGDG ARIDLAGRKA SFNDVDKYSW GGDLLLSSRA GDIRQAAGSL IDLSARNNRG 2401 GTLSAVALAE DAGVVDLQGR ILGGASGDYD AGGTRVPFLG GELEIRAQRL GDGGSLSEQF 2461 TALNQRLNQG EVFGARRFQL KQGDLQIGDG LKAHRIEVSL DNGQLGVSGT VDASGAQVGE 2521 IRLAGGRGLS LGGNALLDAH GSLLRRDSYG QIIDSPNRAM VELSSGSGTL VLASGARIDL 2581 RHGTAAPAEQ VDGVARGTLE LNAPRLGGVS AGDIAIDASG ALDIRGAGSI ALNAVQRYDD 2641 APWGNDPAAG GRPYQVIDQA YLDARHAESS AFIAAALANR ELLDGKLAGL TNATYADAFH 2701 LRPGVEIVSA TADGDLVVQG DLDLSGYRYA SLNPNTPLTE VYGSGEVGAL VLRAGGDLNL 2761 YGSINDGFAP PPDSPDDKGW ILTPGVQPFG GDLVVPGPGV VLGDGTAFLG GRTLNYDLPI 2821 KGTTLAAGTR LATEAVLEQP YTLAAGSVLV ADIHDAAGNL LYAAGSLLRD GVTLEVGSRL 2881 GAGTLLAAPA SVQAMTWPAG VPLPSILREG PSRPNVLLLN GELALARGSL IPSQTEVVLA 2941 GDAPFIELRP SDGVRQGRNW ALAEMLPAGS QSWSMRLVAG ADLAAADNRL VRPDSSASLN 3001 LADTHYQAKI EQSSGGLVFT DQATDWGITP GTPVDESNEW ICGLGPYCAE PPRWTWAPGN 3061 YLGMPAGTAI GEGDLWWCSV DPSLCIENLG KTVVTPQNQL FSVLRTGTGD LDLASAGNLT 3121 QWSPYGVYTA GTQAADVATG FNQPRGLFNG SVLGAGGADY EVLSTSQYQA WYPEHGGNLD 3181 IAVGGDVVGD QWAEKLTSSD PIRPLPPSAA VGNWLWRQGS ADREGVPTAW WVNFGSYVRG 3241 AEGDAPYLVG FTGFGTLGGG NLSMRTGGDA GNIAPRGDGS IPSSGNLNPR SQGLVLAVAG 3301 TGRLTSDGAL QLGGGGDLNV RIGGEVNPSR EARATQTYSS SGFDGLYSGG TIHDLQGALI 3361 NLRGSASLYS GALGGIDPRY DTLLRDPAEV RSRDAFSPTL ASSTGGLTLV AGDTGMRLET 3421 RGDLVLGGVT DPGRVGVPNT VGFTAPDGSV YQGGGIAWFS LWTAHTSIDL FAAGGNLTPS 3481 TQLVEATNAI PMAGRNLSPS DGRFIYPSIV RAAAPEGSIY LGPSSGYMGG VSLNVSTTPY 3541 SLLLAPSLNG ELELLAGDSI YAGGYSVQRS GADPANLPSI WTPAFAGYSD AALLNPIAGN 3601 GSPDGNPAVI GGLPLFYFGP DSAASLARDL QPARFYALTG DIVGLNSGAQ IRFGEQAGNR 3661 AGQTWYEGAG PVWMRAGRDI VASGTPLGQR ISAPSQISTD ASFTGNLFVH DDPNDLSLAQ 3721 AGRDILYGNF NVAGPGTLEI SAGRNILMED RAAITSLGAV VPGDSRPGAD IVLQAGAAGA 3781 DYRAFLERYL DPANLAQGGT PLAEQPGKVV RTYESELAKW LNERFGFAGD AEQAQAFFAG 3841 LPAEQQRIFA RQVYFAELRA GGREYNEVGG VRQSSYLRGR NAIAALFPER DPAGNPISYE 3901 GDIVMYGGAG VHTDFGGDIQ LLSPGGRQVF GIEGEAPPST AGIVTQGQGN IQAYSRDSIL 3961 LGQSRIMTTF GGSILAWSAE GDINAGRGSQ TTVVYTPPRR IYDAWGNVSL SPQVPSTGAG 4021 IATLNPIPEV APGDIDLIAP LGTIDAGEAG IRVSGNVNVA ALQVVNAANI QTQGQSSGIP 4081 LVASVNTGAL TSASAAASSA TQAAEDVSRQ QQAAARQRMP SVITVQVLGF GNERLEPSRD 4141 GASRSPGYNP DSAVQVLGAG ALGEQARSQL TDEERGNLIL //