LOCUS AKO86130.1 1006 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 DEAD/DEAH box helicase protein. ACCESSION CP012001-1981 PROTEIN_ID AKO86130.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_10065" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003425695.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTITEHQIEQ DLLAKLGDLK YSYRPEIRDR AGLEANFREK FQQLNRVNLT DEEFARLLEE 61 IVTPDVFTAA QTLRTRNSFI REDGTPLNYT LVNIEDWCKN SFEVVNQLRI NTDNSHHRFD 121 VILLINGVPV VQIELKTLGI NPRRAIEQIV EYKNDPGNGF TRTLLCFMQV FIVSNRVSTY 181 YFANNNSRHF SFNADERFLP IYQFAALDNT RITGLDDFAD VFLPKCTLGQ MISRYMVLVA 241 SEQKLLMMRP YQIYAVKNIV KCIEENSGNG YIWHTTGSGK TLTSFKASTL LKANPNIEKC 301 LFVVDRKDLD RQTREEFNRF QEGCVESNTN TSELVRRMLS DDAADKVIVC TIQKLGLALD 361 EGSRRNKSRE KRGLATYAEQ LEALRDKRIV FIFDECHRSQ FGDNHQAIKT FFPKAQLFGF 421 TGTPIFEANA SIKQISGEEK TLKTTQDLFQ QCLHEYTISD AIDDRNVLKF HVDYYKPDGK 481 NPPKPGETLA KRAVVDAILA KHDAATGGRK FNAILATASI NDAIAYHALF EEAQAEKLQA 541 NPEFVPLNIA AVFSPPGDVS ADVRQLQEDL PTELEDNQQE TDAKKAALQA IIARYNARFD 601 TNHRIEEFDL YYQDVQQRIK DQQWPDADLR KANPRAPQHK IDITIVVDML LTGFDSKYLN 661 TLYVDKNLKH HGLIQAFSRT NRVLNDTKPF GHILDFRGQQ DAVDAAIALF SGAKADEART 721 IWLVDKAPAV IEKLQEAALG LHSFMEAYGL SGKPEEIATL KGDEARIGFV EAFKKVQKLQ 781 TQLDQYTDLT PEQEASIQAI LPPDELNAFR GQYLETARRL RDERAKPGDA KREELEQLDF 841 EFVLFASATI DYDYIMRLIA DFSTKKPGKA TMSREQLASL IASDAKFIDE RDDITEYVMS 901 LKAGEGLDER AIRMGYQQFK AVKASRELTE LAAKHGLPTA ALQSFMDEVL ERRIFDGEQL 961 TELLAPLELG WKARTQKELA LMSELAPMLK KRAGGRDISG LQAYED //