LOCUS       AKO85280.1               620 aa    PRT              BCT 27-AUG-2015
DEFINITION  Pseudomonas aeruginosa DSM 50071 = NBRC 12689 preprotein
            translocase subunit SecD protein.
ACCESSION   CP012001-1108
PROTEIN_ID  AKO85280.1
SOURCE      Pseudomonas aeruginosa DSM 50071 = NBRC 12689
  ORGANISM  Pseudomonas aeruginosa DSM 50071 = NBRC 12689
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
            1872) Migula 1900 (DSM 50071T), Determined Using PacBio
            Single-Molecule Real-Time Technology
  JOURNAL   Genome Announc 3 (4), e00932-15 (2015)
   PUBMED   26294631
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2015) Research and Development Division, Okinawa
            Institute of Advanced Sciences, Okinawa Biotechnology Business
            Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
            Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP3 v. 2.3.0
            Genome Coverage       :: 843x
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 07/02/2015 10:33:57
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.10
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 5,805
            CDS                          :: 5,710
            Pseudo Genes                 :: 18
            CRISPR Arrays                :: 3
            rRNAs                        :: 12 (5S, 16S, 23S)
            tRNAs                        :: 64
            ncRNA                        :: 1
            Frameshifted Genes           :: 11
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
                     /mol_type="genomic DNA"
                     /strain="DSM 50071"
                     /culture_collection="DSM:50071"
                     /type_material="type strain of Pseudomonas aeruginosa"
                     /db_xref="taxon:1123015"
     protein         /gene="secD"
                     /locus_tag="PA50071_05625"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003118307.1"
                     /note="part of the preprotein secretory system; when
                     complexed with proteins SecF and YajC, SecDFyajC
                     stimulates the proton motive force-driven protein
                     translocation, and appears to be required for the release
                     of mature proteins from the extracytoplasmic side of the
                     membrane; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLNKYPLWKY LLILAVLAVG FIYSAPNLYP DDPAVQISGA STALQVTQAD VDRAAKALTD
       61 AGIAVKANSL SKKGGLIRLV KQDDQLPAKE VVRRTLGDDY VVALNLAQTT PEWLRKLGGS
      121 PMKLGLDLSG GVHFLLEVDM DKAVDARLKV YESEVKSLLR KERVRYRSLP IQDRAIQLGF
      181 TDSESLDKAR SLIAKDFRDF EVVPEERNGL QVLRVALTQA KLAEIREYSI KQNLTTVRNR
      241 VNELGVSEPL VQRQGANRIV VELPGVQDTA EAKRILGKTA NLEFRLAAEP DALKSATETF
      301 EFREPRRPPV PLERGVIITG DQVTDASASF DENGRPQVNI RLDGHGGELM NRATRNNVGR
      361 SMAVVFIEQK PVTRYTKQMV DGVEKEVAVP AFKEEKQIIS LATIQSPLGN QFRITGLDGP
      421 GESSELALLL RAGGLAAPMY FAEERTIGPS LGADNIAKGV DASLWGMLFV SLFIIVIYRF
      481 FGVIATVALA FNMVMLVALM SILGATLTLP GIAGIVLTMG MAVDANVLIF SRIREELANG
      541 MSVQRAIHEG FNRAFTAILD ANLTSLLVGG ILYAMGTGPV KGFAVTMSLG IITSMFTAIM
      601 VTRAMVNLIF GGRDFKKLWI
//