LOCUS AJF01410.1 745 aa PRT BCT 20-JUN-2017 DEFINITION Mycobacterium tuberculosis H37RvSiena putative isocitrate dehydrogenase [NADP] Icd2 (oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP) protein. ACCESSION CP007027-66 PROTEIN_ID AJF01410.1 SOURCE Mycobacterium tuberculosis H37RvSiena ORGANISM Mycobacterium tuberculosis H37RvSiena Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 (bases 1 to 4410911) AUTHORS Santoro,F., Guerrini,V., Lazzeri,E., Iannelli,F. and Pozzi,G. TITLE Genomic polymorphisms in a Laboratory Isolate of Mycobacterium tuberculosis Reference Strain H37Rv (ATCC27294) JOURNAL New Microbiol. 40 (1), 62-69 (2017) PUBMED 27819398 REFERENCE 2 (bases 1 to 4410911) AUTHORS Guerrini,V., Santoro,F. and Pozzi,G. TITLE Direct Submission JOURNAL Submitted (30-DEC-2013) Medical Biotechnology, University of Siena, viale Bracci, Policlinico Le Scotte, Siena 53100, Italy REFERENCE 3 (bases 1 to 4410911) AUTHORS Guerrini,V., Santoro,F. and Pozzi,G. TITLE Direct Submission JOURNAL Submitted (20-FEB-2015) Medical Biotechnology, University of Siena, viale Bracci, Policlinico Le Scotte, Siena 53100, Italy REMARK Protein update by submitter COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation modified by submitter. ##Assembly-Data-START## Assembly Method :: Ray v. 2.3.1 Coverage :: 300 Sequencing Technology :: Illumina ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 12/30/2013 09:28:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.3 (rev. 422554) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,146 CDS :: 4,050 Pseudo Genes :: 42 CRISPR Arrays :: 2 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 45 ncRNA :: 6 Frameshifted Genes :: 34 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Mycobacterium tuberculosis H37RvSiena" /mol_type="genomic DNA" /strain="H37RvSiena" /db_xref="taxon:1437856" protein /gene="icd2" /locus_tag="Y980_0066c" /experiment="EXISTENCE: identified in proteomics study" /note="Rv0066c, (MTV030.09c) Probable icd2,isocitrate dehydrogenase NADP-dependent. Belongs to the monomeric-type family of IDH. Note that in H37Rv, Rv0066c is named icd2 and Rv3339c is icd1 while in CDC1551 and Erdman strains, Rv0066c is icd1 and Rv3339c is icd2." /transl_table=11 /db_xref="GOA:L7N5H0" /db_xref="InterPro:IPR004436" /db_xref="InterPro:IPR024084" /db_xref="UniProtKB/TrEMBL:L7N5H0" BEGIN 1 MSAEQPTIIY TLTDEAPLLA TYAFLPIVRA FAEPAGIKIE ASDISVAARI LAEFPDYLTE 61 EQRVPDNLAE LGRLTQLPDT NIIKLPNISA SVPQLVAAIK ELQDKGYAVP DYPADPKTDQ 121 EKAIKERYAR CLGSAVNPVL RQGNSDRRAP KAVKEYARKH PHSMGEWSMA SRTHVAHMRH 181 GDFYAGEKSM TLDRARNVRM ELLAKSGKTI VLKPEVPLDD GDVIDSMFMS KKALCDFYEE 241 QMQDAFETGV MFSLHVKATM MKVSHPIVFG HAVRIFYKDA FAKHQELFDD LGVNVNNGLS 301 DLYSKIESLP ASQRDEIIED LHRCHEHRPE LAMVDSARGI SNFHSPSDVI VDASMPAMIR 361 AGGKMYGADG KLKDTKAVNP ESTFSRIYQE IINFCKTNGQ FDPTTMGTVP NVGLMAQQAE 421 EYGSHDKTFE IPEDGVANIV DVATGEVLLT ENVEAGDIWR MCIVKDAPIR DWVKLAVTRA 481 RISGMPVLFW LDPYRPHENE LIKKVKTYLK DHDTEGLDIQ IMSQVRSMRY TCERLVRGLD 541 TIAATGNILR DYLTDLFPIL ELGTSAKMLS VVPLMAGGGM YETGAGGSAP KHVKQLVEEN 601 HLRWDSLGEF LALGAGFEDI GIKTGNERAK LLGKTLDAAI GKLLDNDKSP SRKTGELDNR 661 GSQFYLAMYW AQELAAQTDD QQLAEHFASL ADVLTKNEDV IVRELTEVQG EPVDIGGYYA 721 PDSDMTTAVM RPSKTFNAAL EAVQG //