LOCUS       AJC73237.1               922 aa    PRT              BCT 19-SEP-2017
DEFINITION  Pseudothermotoga hypogea DSM 11164 = NBRC 106472 excinuclease
            ABC subunit A protein.
ACCESSION   CP007141-449
PROTEIN_ID  AJC73237.1
SOURCE      Pseudothermotoga hypogea DSM 11164 = NBRC 106472
  ORGANISM  Pseudothermotoga hypogea DSM 11164 = NBRC 106472
            Bacteria; Thermotogae; Thermotogales; Thermotogaceae;
            Pseudothermotoga.
REFERENCE   1  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Genome sequencing of Thermotog hypogea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2014) Department of Biology, University of
            Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1,
            Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 56X
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/17/2014 14:13:17
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,168
            CDS                          :: 2,097
            Pseudo Genes                 :: 21
            CRISPR Arrays                :: 4
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 46
            ncRNA                        :: 1
            Frameshifted Genes           :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudothermotoga hypogea DSM 11164 = NBRC
                     106472"
                     /mol_type="genomic DNA"
                     /strain="DSM 11164 = NBRC 106472"
                     /isolation_source="an African oil producing well"
                     /culture_collection="DSM:11164"
                     /type_material="type strain of Pseudothermotoga hypogea"
                     /db_xref="taxon:1123384"
                     /country="Cameroon"
                     /collection_date="1979"
     protein         /gene="uvrA"
                     /locus_tag="AJ81_02360"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:YP_004660214.1"
                     /note="The UvrABC repair system catalyzes the recognition
                     and processing of DNA lesions. UvrA is an ATPase and a
                     DNA-binding protein. A damage recognition complex composed
                     of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities.
                     When the presence of a lesion has been verified by uvrB,
                     the uvrA molecules dissociate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MNSIRIKGAR VHNLKSIDVE IPKNTITVIT GVSGSGKSSL AMDTIYAEGQ RRYLESLSAY
       61 ARQFLGELKK PDVDNIEGLS PAIAIDQKSA SHNPRSTVGT TTEIYDHLRV LFAKIGEPHC
      121 PSCGRSVEKK SIDEIVKDVF SRFPQSSRIY VLSPIAIDKK GTFKKELQNL ASKGFVRVEV
      181 DGQLFRIEEV GELDKNKRHT IKLVVDRLVL EETERHRIAD DIEIAFRESN GFVEIRNVDT
      241 NESLMFSEHM MCPVCGIGLP EINPKLFSFN NPYGACPNCH GLGYNLQIDP SLVVNENLSI
      301 EEGALLPFGQ SEYYMPILRK IVKMFGASSK VPFKELPTIV QEALLYGYAD FEGAVNFLER
      361 RYEQTASEDI KQWIEKNFIV QKVCPVCNGN RLKPEALAVT IRGLNIIDVT NLTIEKAYSF
      421 FEELQNSLTD RETKIVGDLL IEIKKRLQFM LDVGLGYLTL SRPVNTLSGG EAQRIRLATQ
      481 IGSGLTGVTY VLDEPTIGLH QRDNLRLINT LKKLKDLGNT VIVVEHDEEI IRSADYIVDL
      541 GPYGGERGGK VVFAGTVQRL IDNPDGSLTG QYLAGIKKIE HPVARRKGNG KFLTIVGARH
      601 NNLKNITVSF PLGTFICVTG VSGSGKSSLI IDTLYPALMN AIYRTKLFVG EHDRIEGLEN
      661 VDKVIAIDQS PIGRTPRSNP ATYTKVFDDI RELFAMTPEA KARGYTKSRF SFNLKGGRCE
      721 ACQGHGLVKI EMLFLPDVYV ECDVCKGKRY NEETLQVRYR GKNIHEVLEM SVEEALEFFR
      781 NVPTIYRTLS LLNEVGLGYI KLGQPATTLS GGEAQRIKLA SELRKIATGK TIYILDEPTV
      841 GLHFEDVKKL INVLHRLVDK GNTVIVIEHN LDVVKNADYI IDLGPEGGDD GGYVIACGTP
      901 EEVAKVEGSH TGRFLRKVLN AG
//