LOCUS       AJC72989.1               426 aa    PRT              BCT 19-SEP-2017
DEFINITION  Pseudothermotoga hypogea DSM 11164 = NBRC 106472 preprotein
            translocase subunit SecY protein.
ACCESSION   CP007141-174
PROTEIN_ID  AJC72989.1
SOURCE      Pseudothermotoga hypogea DSM 11164 = NBRC 106472
  ORGANISM  Pseudothermotoga hypogea DSM 11164 = NBRC 106472
            Bacteria; Thermotogae; Thermotogales; Thermotogaceae;
            Pseudothermotoga.
REFERENCE   1  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Genome sequencing of Thermotog hypogea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2014) Department of Biology, University of
            Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1,
            Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 56X
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/17/2014 14:13:17
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,168
            CDS                          :: 2,097
            Pseudo Genes                 :: 21
            CRISPR Arrays                :: 4
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 46
            ncRNA                        :: 1
            Frameshifted Genes           :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudothermotoga hypogea DSM 11164 = NBRC
                     106472"
                     /mol_type="genomic DNA"
                     /strain="DSM 11164 = NBRC 106472"
                     /isolation_source="an African oil producing well"
                     /culture_collection="DSM:11164"
                     /type_material="type strain of Pseudothermotoga hypogea"
                     /db_xref="taxon:1123384"
                     /country="Cameroon"
                     /collection_date="1979"
     protein         /gene="secY"
                     /locus_tag="AJ81_00905"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:YP_001470229.1"
                     /note="forms heterotrimeric complex in the membrane; in
                     bacteria the complex consists of SecY which forms the
                     channel pore and SecE and SecG; the SecG subunit is not
                     essential; in bacteria translocation is driven via the
                     SecA ATPase; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MWKALRNAFK IPELRDRIVF TVLTLIVFRL GVYIPVPGIN IQAWAEAFKR FAGAAAGGII
       61 SFYDVFTGGA LENFSIFAMS VTPYINASIV LQLLSSVITK LREMLREGEE GRKKFAKYTR
      121 NLTIVLGAFQ SFIVSFSLVR QSPDIVAYGL NPMVFVLIST ISMLAGTMFL LWLGDRITEK
      181 GIGNGISILI FAGIVARYPS YFGSVLLGNL NLFGWIFLIA IAVVTVAGII YVQQAERRIT
      241 IQYATRVVGR RVYGGASTYI PIKVNQGGVI PIIFASAIVM IPAAIAEMTG LQWLRAIFSP
      301 GNALYIILYG LLVFFFTYFY SVVVFDPHEV SENVRKYGGF IPGIRPGKPT EEYIQRVLSR
      361 VTFLGAVFLV VIALLPHFVE AVTRVNIVIG GTSTLIAVGV ALDVLQQMEA HMIMRHYEGF
      421 VKKGLK
//