LOCUS       AJC72852.1               297 aa    PRT              BCT 19-SEP-2017
DEFINITION  Pseudothermotoga hypogea DSM 11164 = NBRC 106472 D-alanyl-
            alanine synthetase protein.
ACCESSION   CP007141-9
PROTEIN_ID  AJC72852.1
SOURCE      Pseudothermotoga hypogea DSM 11164 = NBRC 106472
  ORGANISM  Pseudothermotoga hypogea DSM 11164 = NBRC 106472
            Bacteria; Thermotogae; Thermotogales; Thermotogaceae;
            Pseudothermotoga.
REFERENCE   1  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Genome sequencing of Thermotog hypogea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2165416)
  AUTHORS   Zhang,X., Alvare,G., Fristensky,B., Chen,L., Suen,T., Chen,Q. and
            Ma,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2014) Department of Biology, University of
            Waterloo, 200 University Avenue West, Waterloo, Ontario N2L 3G1,
            Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 56X
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 01/17/2014 14:13:17
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.3 (rev. 423251)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,168
            CDS                          :: 2,097
            Pseudo Genes                 :: 21
            CRISPR Arrays                :: 4
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 46
            ncRNA                        :: 1
            Frameshifted Genes           :: 9
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudothermotoga hypogea DSM 11164 = NBRC
                     106472"
                     /mol_type="genomic DNA"
                     /strain="DSM 11164 = NBRC 106472"
                     /isolation_source="an African oil producing well"
                     /culture_collection="DSM:11164"
                     /type_material="type strain of Pseudothermotoga hypogea"
                     /db_xref="taxon:1123384"
                     /country="Cameroon"
                     /collection_date="1979"
     protein         /locus_tag="AJ81_00050"
                     /EC_number="6.3.2.4"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:YP_005471982.1"
                     /note="D-alanine--D-alanine ligase; DdlA; DdlB;
                     cytoplasmic; catalyzes the formation of D-alanyl-D-alanine
                     from two D-alanines in peptidoglycan synthesis; there are
                     two forms of this enzyme in Escherichia coli; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKIAVLMGGV SREREISLRS GENVVKALKK LGHEVVPIDV KEDFFLVLPS LKQFDLVFIA
       61 LHGKFGEDGT VQALLDWIGV PYTGSGVLAS ALCFDKLMTY RIVEKFVPVP EYTVIDKPTR
      121 ESPFGFPCVL KPRREGSSIG VHICDNAEEL EHYSQIELSL YGELVLQRYV RGRELTASLI
      181 EMDGELRILP ILELRPRRRF YDYIAKYTPN MTEFVLPAPL TEEEYRAVCE SCLKAFKACE
      241 CKGFARIDGI LKDGIFYFLE INTIPGMTDL SDMPASARAA GMSFEDLIDA IVKTVRR
//