LOCUS       AGF91401.1               365 aa    PRT              HTG 26-FEB-2013
DEFINITION  Cyanophage P-SS1 photosystem II D1 protein protein.
ACCESSION   JF974306-106
PROTEIN_ID  AGF91401.1
SOURCE      Cyanophage P-SS1
  ORGANISM  Cyanophage P-SS1
            Viruses; Duplodnaviria; Heunggongvirae; Uroviricota;
            Caudoviricetes; Kyanoviridae; Ronodorvirus; Ronodorvirus ssm4.
REFERENCE   1  (bases 1 to 178284)
  AUTHORS   Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
            Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
            Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
            Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
            Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
            Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
            Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
            Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
            Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
            Haas,B., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     The Genome Sequence of Cyanophage P-SS1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 178284)
  AUTHORS   Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C.,
            Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K.,
            Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z.,
            Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A.,
            Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C.,
            Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S.,
            Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q.,
            Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S.,
            Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W.,
            Haas,B., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2010) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     This genome was sequenced by the Broad Institute and co-owned with
            CAMERA.
            
            ##Metadata-START##
            Isolation method                 :: double dilution series
            Template preparation method      :: lysate
            Phage/virus type                 :: DNA:ds Viral DNA
            Phage/virus "hybrid" information :: Not available
            Phage/virus taxonomy             :: Siphoviridae
            Phage/virus strain               :: Not available
            Morphology                       :: Siphovirus
            Latitude                         :: 38.10 N
            Longitude                        :: 73.09 W
            Depth (m)                        :: 60.00
            Salinity (psu)                   :: 36.50
            Temperature (C)                  :: 22.40
            Collection date                  :: 12-Dec-2001
            Sample collection site           :: slope
            Habitat description              :: open ocean
            Other metadata available         :: Binder cruise
            Lab Host                         :: Prochlorococcus marinus str.
                                                MIT 9313
            ##Metadata-END##
            * NOTE: This is a 'working draft' sequence. It currently
            * consists of 2 contigs. The true order of the pieces
            * is not known and their order in this sequence record is
            * arbitrary. Gaps between the contigs are represented as
            * runs of N, but the exact sizes of the gaps are unknown.
            * This record will be updated with the finished sequence
            * as soon as it is available and the accession number will
            * be preserved.
            *        1   150061: contig of 150061 bp in length
            *   150062   150161: gap of unknown length
            *   150162   178284: contig of 28123 bp in length.
FEATURES             Qualifiers
     source          /organism="Cyanophage P-SS1"
                     /mol_type="genomic DNA"
                     /strain="P-SS1"
                     /isolation_source="slope"
                     /db_xref="taxon:889957"
                     /lab_host="Prochlorococcus marinus str. MIT 9313"
                     /lat_lon="38.10 N 73.09 W"
                     /collection_date="12-Dec-2001"
     protein         /locus_tag="CPYG_00106"
                     /transl_table=11
BEGIN
        1 MTTLNSSSLT RKRGGLLSGW DEFCEWVTST DNRIYVGWFG VLMIPCLLTA AACFIVAFIA
       61 APPVDIDGIR EPVAGSFLYG NNIISGAVVP SSNAIGLHFY PIWEAATMDE WLYNGGPYQL
      121 VIFHFLIGIS AYMGRQWELS YRLGMRPWIC VAYSAPVSAA FAVFLVYPFG QGSFSDGMPL
      181 GISGTFNFMF VFQAEHNILM HPFHMAGVAG MFGGSLFSAM HGSLVTSSLI RETTENESQN
      241 YGYKFGQEEE TYNIVAAHGY FGRLIFQYAS FNNSRSLHFF LAVFPVVCVW LTSMGICTMA
      301 FNLNGFNFNQ SVVDANGKIV PTWGDVLNRA NLGMEVMHER NAHNFPLDLA SAESTTVALT
      361 APSIG
//