LOCUS AEO98282.1 1053 aa PRT HTG 28-NOV-2011 DEFINITION Emiliania huxleyi virus 203 RNA polymerase subunit II protein. ACCESSION JF974291-272 PROTEIN_ID AEO98282.1 SOURCE Emiliania huxleyi virus 203 ORGANISM Emiliania huxleyi virus 203 Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Algavirales; Phycodnaviridae; Coccolithovirus. REFERENCE 1 (bases 1 to 400520) AUTHORS Nissimov,J.I., Worthy,C.A., Rooks,P., Napier,J.A., Kimmance,S.A., Henn,M.R., Ogata,H. and Allen,M.J. TITLE Draft Genome Sequence of the Coccolithovirus Emiliania huxleyi Virus 203 JOURNAL J. Virol. 85 (24), 13468-13469 (2011) PUBMED 22106382 REFERENCE 2 (bases 1 to 400520) AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genome Sequencing Platform TITLE The Genome Sequence of Emiliania huxleyi virus 203 JOURNAL Unpublished REFERENCE 3 (bases 1 to 400520) AUTHORS Henn,M.R., Allen,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Direct Submission JOURNAL Submitted (22-NOV-2010) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA COMMENT This genome was sequenced by the Broad Institute and co-owned with CAMERA. ##Metadata-START## Isolation method :: triple-plaque-purified Template preparation method :: CsCl-gradient Phage/virus type :: DNA:ds Viral DNA Phage/virus "hybrid" information :: not applicable Phage/virus taxonomy :: Coccolithoviridae Phage/virus strain :: Strain 203 Morphology :: Icosahedral Latitude :: 50.006N Longitude :: 4.3145W Depth (m) :: 15.00 Collection date :: 27-Jul-2003 Sample collection site :: English Channel Filter fraction (um) :: 0.45 Volume filtered (L) :: 1.0 Habitat description :: Collected from natural E. huxleyi bloom Other metadata available :: http://www.westernchannelobserv atory.org.uk/data.php References :: PMID: 17359269; PMID: 16099989; PMID: 12209309; PMID: 16553948 Lab Host :: Emiliania huxleyi 1516 ##Metadata-END## * NOTE: This is a 'working draft' sequence. It currently * consists of 7 contigs. The true order of the pieces * is not known and their order in this sequence record is * arbitrary. Gaps between the contigs are represented as * runs of N, but the exact sizes of the gaps are unknown. * This record will be updated with the finished sequence * as soon as it is available and the accession number will * be preserved. * 1 20862: contig of 20862 bp in length * 20863 20962: gap of unknown length * 20963 45640: contig of 24678 bp in length * 45641 45740: gap of unknown length * 45741 78538: contig of 32798 bp in length * 78539 78638: gap of unknown length * 78639 123169: contig of 44531 bp in length * 123170 123269: gap of unknown length * 123270 178489: contig of 55220 bp in length * 178490 178589: gap of unknown length * 178590 257650: contig of 79061 bp in length * 257651 257750: gap of unknown length * 257751 400520: contig of 142770 bp in length. FEATURES Qualifiers source /organism="Emiliania huxleyi virus 203" /mol_type="genomic DNA" /strain="203" /isolation_source="English Channel" /db_xref="taxon:181212" /lab_host="Emiliania huxleyi 1516" /lat_lon="50.006 N 4.3145 W" /collection_date="27-Jul-2003" protein /locus_tag="ELVG_00233" BEGIN 1 MIPVHGLSTN AKVVKKVNFS VYGSDTIRQN AVTRVNEIAL YTRGIPTHNG VNSLAMGSSD 61 RRIRCTTCNE LMQKCPGHNG EIRLPLPVYQ ALYIDHTLKV LRSVCFFCSE ICLTDEDKVA 121 LMEKYTDDKT RFNHTYAIAR TRKKCPHCKG IRPSYVRGPL GIKTEWVDKS FDSEEEQEYA 181 MQKFTPALAY SILDNIKDID AKNFFGKGLH PRDLIATSVL VPPPIIRPAI STAEGSRTKG 241 QDDITLRLQE INRRGNELRL CMNKQEDSGL PTFLCDANKV LPPKTDTITY TVVDRLLNVD 301 ALTPDLIDRW NRLQADVFGL VNPAAIRGGM PASMANNNRN SANGKYIIDR IRGKNGRFRN 361 CLMGKRVNFS GRSVITPDST IDVDQLGVPY ELAMILTVPE KVTPSNIADL RTRILNGPTE 421 LIGAQSVINT EGDLISLKSC KNRADIVLRI GWIVERHLKN GDWVIFNRQP TLHRMGFNGH 481 RVVLTKGKTF RLNLSVCAVY NADFDGDEMN IHVCQSACAT SEVSTLMAIN RNIISAQNNK 541 PCFGIVQDSL VGAWLMTDPS VFLTRADMLR FRIYVKFANN GTTMLPPPAI SKPKELWTGS 601 QLISFVFPYT LMYQRGSISG ITSYDTKDLL IQNGQILFGR LSKSTLGATA GAISDIIHHE 661 HGGPKKAVEF LSDVQRVVNQ WLLYKNSFSI GASDCVTNEQ SHNEVVECIK SAVNNSKMIL 721 TSKVPKSLKE MAEGATTRIL SDVIMKTATI IKNNAPPDNS IITCVTAGSK GSPLNIAQVC 781 GQVGQQIVGG ERILNGTSGR TLPCFKHGEH ATVNANGYIQ NSFMLGLQPT EFFFSAMSGR 841 EGLVDTAVKT ANSGYIQRCL VKASEDNMCN YDGTIRNAQG MVVQFKYADN FDPCKVERIK 901 VEPLLMTSEE IKRNAGPLEY DVIMSLRENA QKVLSQSNKP LMDVVLLPIN ISRMFESATW 961 NNDVPHEFDE ESLLTAVSEV VHEIVKKHPV CKYVVPLYIQ WCMRIGNIPE HLNVKAFLCE 1021 VKHRCLSSVV AGGDAVGNTA ALSIGEPSTQ AYI //