LOCUS AEE73685.1 619 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana DEAD box RNA helicase 1 protein. ACCESSION CP002686-129 PROTEIN_ID AEE73685.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="DRH1" /locus_tag="AT3G01540" /gene_synonym="ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1" /gene_synonym="ATDRH1" /gene_synonym="DEAD box RNA helicase 1" /gene_synonym="F4P13.9" /gene_synonym="F4P13_9" /gene_synonym="RNA HELICASE DRH1" /inference="Similar to RNA sequence, EST:INSD:EH841870.1,INSD:BP787749.1,INSD:BP615182.1, INSD:BP785012.1,INSD:T43848.1,INSD:EL102123.1, INSD:BP786282.1,INSD:BP626750.1,INSD:EL203917.1, INSD:EL315405.1,INSD:EL103123.1,INSD:AV815750.1, INSD:ES077655.1,INSD:EL121792.1,INSD:ES110153.1, INSD:BP590736.1,INSD:EH826560.1,INSD:EL194383.1, INSD:CD529771.1,INSD:BP613015.1,INSD:EL056695.1, INSD:BP790577.1,INSD:AV548589.1,INSD:DR258993.1, INSD:AV815251.1,INSD:EH967163.1,INSD:EL987048.1, INSD:ES005188.1,INSD:BP640556.1,INSD:BP781196.1, INSD:BP648768.1,INSD:EL995166.1,INSD:BP784810.1, INSD:EG508681.1,INSD:EH974242.1,INSD:EL312291.1, INSD:EL290987.1,INSD:EG508667.1,INSD:BP597666.1, INSD:BP631225.1,INSD:ES191490.1,INSD:BP787955.1, INSD:EL266730.1,INSD:EG440291.1,INSD:AV794320.1, INSD:EL258947.1,INSD:BP628779.1,INSD:CB260959.1, INSD:AV783685.1,INSD:EH862708.1,INSD:EL183981.1, INSD:EL264886.1,INSD:EL004778.1,INSD:AV801696.1, INSD:BP660264.1,INSD:EL169086.1,INSD:EL150370.1, INSD:N65298.1,INSD:BP652300.1,INSD:DR258988.1, INSD:BP636219.1,INSD:BP637762.1,INSD:BP782276.1, INSD:AV541922.1,INSD:EL154395.1,INSD:AV540998.1, INSD:AV795629.1,INSD:EL318816.1,INSD:BP607275.1, INSD:BP787726.1,INSD:BP593828.1,INSD:BP635440.1, INSD:BP777708.1,INSD:AV816951.1,INSD:ES032057.1, INSD:BP582351.1,INSD:AV794753.1,INSD:AA651159.1, INSD:BP794281.1,INSD:ES095301.1,INSD:EG461059.1, INSD:BP647968.1,INSD:DR227828.1,INSD:BP608240.1, INSD:AV794317.1,INSD:EL306999.1,INSD:EL046430.1, INSD:EG461060.1,INSD:EH829663.1,INSD:BP658261.1, INSD:AV541894.1,INSD:BP651452.1,INSD:CD532456.1, INSD:BP643610.1,INSD:BP658771.1,INSD:ES176986.1, INSD:BP613443.1,INSD:AV792941.1,INSD:CD534425.1, INSD:CB253438.1,INSD:BP786896.1,INSD:ES101558.1, INSD:BP651930.1,INSD:ES158017.1,INSD:AV813943.1, INSD:BP657319.1,INSD:AV540879.1,INSD:AV820980.1, INSD:EL191738.1,INSD:EG508680.1,INSD:DR258990.1, INSD:ES102566.1,INSD:EH850728.1,INSD:ES141651.1, INSD:AV821082.1,INSD:BP614404.1,INSD:EH913596.1, INSD:BP650353.1,INSD:BP786322.1,INSD:EL285033.1, INSD:EH976461.1,INSD:ES100550.1,INSD:BP651060.1, INSD:EL227974.1,INSD:ES030481.1,INSD:EG440290.1, INSD:BP658509.1,INSD:BP578578.1,INSD:BP607576.1, INSD:DR258981.1,INSD:EL216670.1,INSD:EL138511.1, INSD:AV824478.1,INSD:BP639154.1,INSD:DR259443.1, INSD:DR258982.1,INSD:EL194872.1,INSD:EL980051.1, INSD:BP781715.1,INSD:EL159122.1,INSD:EL214274.1, INSD:EL009939.1,INSD:BP642668.1,INSD:H36043.1, INSD:EL975580.1,INSD:EL245278.1,INSD:BE522709.1, INSD:EL042297.1,INSD:EL190879.1,INSD:EL056743.1, INSD:BP566314.1,INSD:DR258991.1,INSD:BP632240.1, INSD:AV806531.1,INSD:AA395076.1,INSD:EL297599.1, INSD:EL112614.1,INSD:CD531694.1,INSD:BP616349.1, INSD:EG464311.1,INSD:BP628978.1,INSD:AV810595.1, INSD:EL302142.1,INSD:BP790171.1,INSD:BP619883.1, INSD:EH856340.1,INSD:BP662973.1,INSD:BP585512.1, INSD:EH916983.1,INSD:AB050574.1,INSD:DR258983.1, INSD:EH960243.1,INSD:ES026683.1,INSD:EH857328.1, INSD:AV802449.1,INSD:EG464310.1,INSD:BP601164.1, INSD:BP652381.1,INSD:EH986257.1,INSD:BP579376.1, INSD:BP786097.1,INSD:BP609469.1,INSD:BP633052.1, INSD:DR258986.1,INSD:BP786023.1,INSD:EL265422.1, INSD:AV814893.1,INSD:BP779427.1,INSD:AV792279.1, INSD:BP576030.1,INSD:EH880862.1,INSD:BP605267.1, INSD:ES115791.1,INSD:EH906579.1" /inference="Similar to RNA sequence, mRNA:INSD:BX823517.1,INSD:AB010259.1" /note="DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /db_xref="TAIR:AT3G01540" /db_xref="Araport:AT3G01540" intron_pos 97:0 (1/7) intron_pos 150:0 (2/7) intron_pos 173:0 (3/7) intron_pos 263:0 (4/7) intron_pos 380:0 (5/7) intron_pos 472:2 (6/7) intron_pos 575:2 (7/7) BEGIN 1 MAATAAASVV RYAPEDHTLP KPWKGLIDDR TGYLYFWNPE TNVTQYEKPT PSLPPKFSPA 61 VSVSSSVQVQ QTDAYAPPKD DDKYSRGSER VSRFSEGGRS GPPYSNGAAN GVGDSAYGAA 121 STRVPLPSSA PASELSPEAY SRRHEITVSG GQVPPPLMSF EATGFPPELL REVLSAGFSA 181 PTPIQAQSWP IAMQGRDIVA IAKTGSGKTL GYLIPGFLHL QRIRNDSRMG PTILVLSPTR 241 ELATQIQEEA VKFGRSSRIS CTCLYGGAPK GPQLRDLERG ADIVVATPGR LNDILEMRRI 301 SLRQISYLVL DEADRMLDMG FEPQIRKIVK EIPTKRQTLM YTATWPKGVR KIAADLLVNP 361 AQVNIGNVDE LVANKSITQH IEVVAPMEKQ RRLEQILRSQ EPGSKVIIFC STKRMCDQLT 421 RNLTRQFGAA AIHGDKSQPE RDNVLNQFRS GRTPVLVATD VAARGLDVKD IRAVVNYDFP 481 NGVEDYVHRI GRTGRAGATG QAFTFFGDQD SKHASDLIKI LEGANQRVPP QIREMATRGG 541 GGMNKFSRWG PPSGGRGRGG DSGYGGRGSF ASRDSRSSNG WGRERERSRS PERFNRAPPP 601 SSTGSPPRSF HETMMMKHR //