LOCUS AEE73617.2 274 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana polypyrimidine tract-binding protein 1 protein. ACCESSION CP002686-43 PROTEIN_ID AEE73617.2 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="PTB1" /locus_tag="AT3G01150" /gene_synonym="ATPTB1" /gene_synonym="POLYPYRIMIDINE TRACT-BINDING" /gene_synonym="polypyrimidine tract-binding protein 1" /gene_synonym="POLYPYRIMIDINE TRACT-BINDING PROTEIN 1" /gene_synonym="PTB" /gene_synonym="T4P13.16" /gene_synonym="T4P13_16" /inference="Similar to RNA sequence, EST:INSD:ES105956.1,INSD:EL124653.1,INSD:EG427811.1, INSD:T42135.1,INSD:DR299213.1,INSD:ES020955.1, INSD:CF774130.1,INSD:DR371069.1,INSD:EH897835.1, INSD:T04473.1,INSD:EL265989.1,INSD:EL191737.1, INSD:DR299216.1,INSD:DR299214.1,INSD:BE530321.1, INSD:DR299211.1,INSD:ES016377.1,INSD:EL252275.1, INSD:BP794786.1,INSD:DR299215.1,INSD:DR299217.1, INSD:DR299208.1,INSD:ES168313.1,INSD:DR299218.1, INSD:AV807552.1,INSD:AV809137.1,INSD:DR299210.1, INSD:EL028796.1,INSD:AV441089.1,INSD:EL263814.1, INSD:AV829325.1,INSD:AV536210.1,INSD:DR299206.1" /inference="Similar to RNA sequence, mRNA:INSD:BX823271.1" /note="POLYPYRIMIDINE TRACT-BINDING (PTB); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: pollen germination, regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 2 (TAIR:AT5G53180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT3G01150" /db_xref="Araport:AT3G01150" intron_pos 7:0 (1/7) intron_pos 28:0 (2/7) intron_pos 84:2 (3/7) intron_pos 104:0 (4/7) intron_pos 139:0 (5/7) intron_pos 166:1 (6/7) intron_pos 204:0 (7/7) BEGIN 1 MPIIGQVFSA FGFVHKIATF EKAAGFQALV QFTDVETASA ARSALDGRSI PRYLLSAHVG 61 SCSLRMSYSA HTDLNIKFQS HRSRDYTNPY LPVNQTAMDG SMQPALGADG KKVESQSNVL 121 LGLIENMQYA VTVDVLHTVF SAYGTVQKIA IFEKNGSTQA LIQYSDIPTA AMAKEALEGH 181 CIYDGGYCKL RLSYSRHTDL NVKAFSDKSR DYTLPDLSLL VAQKGPAVSG SAPPAGWQNP 241 QAQSQYSGYG GSPYMYPSSD PNGASPSGQP PYYG //