LOCUS       AEE27254.1               106 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana DNA-directed RNA polymerase, subunit
            M, archaeal protein.
ACCESSION   CP002684-52
PROTEIN_ID  AEE27254.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 30427671)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 30427671)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     protein         /locus_tag="AT1G01210"
                     /gene_synonym="F6F3.2"
                     /gene_synonym="F6F3_2"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES118081.1,INSD:EG453100.1,INSD:AU238442.1,
                     INSD:ES203729.1,INSD:EL236865.1,INSD:EL288268.1,
                     INSD:ES075150.1,INSD:ES066624.1,INSD:DR332899.1,
                     INSD:EL312407.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AK229520.1,INSD:BX817667.1,INSD:BX813659.1,
                     INSD:BT008558.1,INSD:BX818201.1,INSD:BT008671.1"
                     /note="DNA-directed RNA polymerase, subunit M, archaeal;
                     FUNCTIONS IN: in 6 functions; INVOLVED IN: RNA elongation,
                     regulation of transcription, DNA-dependent, transcription,
                     regulation of transcription; LOCATED IN: nucleus; CONTAINS
                     InterPro DOMAIN/s: Zinc finger, TFIIS-type
                     (InterPro:IPR001222), DNA-directed RNA polymerase, M/15kDa
                     subunit (InterPro:IPR001529), DNA-directed RNA polymerase,
                     subunit M, archaeal (InterPro:IPR006288), DNA-directed RNA
                     polymerase M, 15kDa subunit, conserved site
                     (InterPro:IPR019761); BEST Arabidopsis thaliana protein
                     match is: DNA-directed RNA polymerase, subunit M, archaeal
                     (TAIR:AT4G07950.1); Has 1129 Blast hits to 1129 proteins
                     in 326 species: Archae - 242; Bacteria - 0; Metazoa - 276;
                     Fungi - 294; Plants - 112; Viruses - 0; Other Eukaryotes -
                     205 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G01210"
                     /db_xref="TAIR:AT1G01210"
     intron_pos      36:0 (1/2)
     intron_pos      66:1 (2/2)
BEGIN
        1 MEFCPTCGNL LRYEGGGNSR FFCSTCPYVA YIQRQVEIKK KQLLVKKSIE AVVTKDDIPT
       61 AAETEAPCPR CGHDKAYFKS MQIRSADEPE SRFYRCLKCE FTWREE
//