LOCUS AEE27231.1 293 aa PRT PLN 20-JUL-2017 DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs) family protein protein. ACCESSION CP002684-24 PROTEIN_ID AEE27231.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 30427671) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J., Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B., Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J., Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L., Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S., Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X., Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J., Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G., Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H., Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H., Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T., Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G., Fraser,C.M., Venter,J.C. and Davis,R.W. TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 816-820 (2000) PUBMED 11130712 REFERENCE 2 (bases 1 to 30427671) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="1" /ecotype="Columbia" protein /locus_tag="AT1G01080" /gene_synonym="T25K16.19" /gene_synonym="T25K16_19" /inference="Similar to RNA sequence, EST:INSD:EH976658.1,INSD:DR326291.1,INSD:EH830851.1, INSD:AV796372.1,INSD:DR326298.1,INSD:EL227681.1, INSD:DR239547.1,INSD:DR326292.1,INSD:EG517150.1, INSD:AF066871.1,INSD:DR326297.1,INSD:EL064291.1, INSD:EL057454.1,INSD:EH970326.1,INSD:EL103429.1, INSD:DR239585.1,INSD:EG513769.1,INSD:DR232463.1, INSD:BP786153.1,INSD:AV556653.1,INSD:DR373419.1, INSD:EL268375.1,INSD:EH973070.1,INSD:BP613432.1, INSD:DR326294.1,INSD:EL217393.1,INSD:DR239584.1, INSD:BP786560.1,INSD:EH968735.1,INSD:DR259580.1, INSD:EL151156.1,INSD:CB262280.1,INSD:DR326290.1, INSD:EH967120.1,INSD:AI099516.1,INSD:AI996061.1, INSD:BP810876.1,INSD:EG514078.1,INSD:EL236484.1, INSD:DR326293.1,INSD:EL052914.1,INSD:ES132460.1, INSD:BP666924.1,INSD:BP783234.1,INSD:DR239556.1, INSD:DR326299.1,INSD:EG517151.1,INSD:EH948741.1, INSD:DR326289.1,INSD:DR326296.1,INSD:AV522419.1, INSD:EH891680.1,INSD:BP844284.1,INSD:DR326300.1, INSD:EH958364.1,INSD:ES120608.1" /inference="similar to RNA sequence, mRNA:INSD:AF419554.1,INSD:AY086138.1,INSD:AY132012.1" /note="RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, nucleus, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G60000.1); Has 509067 Blast hits to 499893 proteins in 22124 species: Archae - 10819; Bacteria - 303967; Metazoa - 99035; Fungi - 14863; Plants - 31737; Viruses - 35534; Other Eukaryotes - 13112 (source: NCBI BLink)." /db_xref="Araport:AT1G01080" /db_xref="TAIR:AT1G01080" intron_pos 139:0 (1/3) intron_pos 173:0 (2/3) intron_pos 276:0 (3/3) BEGIN 1 MAASCFAIPL SSSSRSSHNA IPKYKTLISS SSYSYLESLK LQFSSSNSFH HSSLSRPFVA 61 QPLQIKVSSS ELSVLDEEKE EEVVKGEAEP NKDSVVSKAE PVKKPRPCEL YVCNIPRSYD 121 IAQLLDMFQP FGTVISVEVS RNPQTGESRG SGYVTMGSIN SAKIAIASLD GTEVGGREMR 181 VRYSVDMNPG TRRNPEVLNS TPKKILMYES QHKVYVGNLP WFTQPDGLRN HFSKFGTIVS 241 TRVLHDRKTG RNRVFAFLSF TSGEERDAAL SFNGTQYEGR RIIVREGIEK SES //