LOCUS AEE27221.1 1910 aa PRT PLN 20-JUL-2017 DEFINITION Arabidopsis thaliana dicer-like 1 protein. ACCESSION CP002684-10 PROTEIN_ID AEE27221.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 30427671) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J., Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B., Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J., Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L., Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S., Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X., Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J., Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G., Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H., Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H., Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T., Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G., Fraser,C.M., Venter,J.C. and Davis,R.W. TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 816-820 (2000) PUBMED 11130712 REFERENCE 2 (bases 1 to 30427671) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="1" /ecotype="Columbia" protein /gene="DCL1" /locus_tag="AT1G01040" /gene_synonym="ABNORMAL SUSPENSOR 1" /gene_synonym="ASU1" /gene_synonym="ATDCL1" /gene_synonym="CAF" /gene_synonym="CARPEL FACTORY" /gene_synonym="dicer-like 1" /gene_synonym="DICER-LIKE 1" /gene_synonym="EMB60" /gene_synonym="EMB76" /gene_synonym="EMBRYO DEFECTIVE 60" /gene_synonym="EMBRYO DEFECTIVE 76" /gene_synonym="SHORT INTEGUMENTS 1" /gene_synonym="SIN1" /gene_synonym="SUS1" /gene_synonym="SUSPENSOR 1" /gene_synonym="T25K16.4" /gene_synonym="T25K16_4" /note="dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1)." /db_xref="Araport:AT1G01040" /db_xref="TAIR:AT1G01040" intron_pos 312:0 (1/19) intron_pos 350:0 (2/19) intron_pos 420:1 (3/19) intron_pos 552:0 (4/19) intron_pos 625:1 (5/19) intron_pos 683:0 (6/19) intron_pos 724:0 (7/19) intron_pos 777:2 (8/19) intron_pos 855:2 (9/19) intron_pos 906:0 (10/19) intron_pos 967:0 (11/19) intron_pos 1022:0 (12/19) intron_pos 1054:0 (13/19) intron_pos 1263:2 (14/19) intron_pos 1296:1 (15/19) intron_pos 1360:0 (16/19) intron_pos 1662:0 (17/19) intron_pos 1717:0 (18/19) intron_pos 1852:2 (19/19) BEGIN 1 MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI 61 DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV KENGLQKNGG KRDEFSKEEG 121 DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR 181 DGRDREVRGY WERDKVGSNE LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER 241 KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV 301 FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN 361 ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT PKDKRPAIFG MTASPVNLKG 421 VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ 481 MIAAVEEAAQ ASSRKSKWQF MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT 541 LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA 601 AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ 661 HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG HNNSQEMKSS QMQDTISKFR 721 DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV 781 SHAAFLRNAR NSEETLRKEA IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA 841 VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM 901 RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG 961 VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD PFLSEVSEFA ILFGNELDAE 1021 VVLSMSMDLY VARAMITKAS LAFKGSLDIT ENQLSSLKKF HVRLMSIVLD VDVEPSTTPW 1081 DPAKAYLFVP VTDNTSMEPI KGINWELVEK ITKTTAWDNP LQRARPDVYL GTNERTLGGD 1141 RREYGFGKLR HNIVFGQKSH PTYGIRGAVA SFDVVRASGL LPVRDAFEKE VEEDLSKGKL 1201 MMADGCMVAE DLIGKIVTAA HSGKRFYVDS ICYDMSAETS FPRKEGYLGP LEYNTYADYY 1261 KQKYGVDLNC KQQPLIKGRG VSYCKNLLSP RFEQSGESET VLDKTYYVFL PPELCVVHPL 1321 SGSLIRGAQR LPSIMRRVES MLLAVQLKNL ISYPIPTSKI LEALTAASCQ ETFCYERAEL 1381 LGDAYLKWVV SRFLFLKYPQ KHEGQLTRMR QQMVSNMVLY QFALVKGLQS YIQADRFAPS 1441 RWSAPGVPPV FDEDTKDGGS SFFDEEQKPV SEENSDVFED GEMEDGELEG DLSSYRVLSS 1501 KTLADVVEAL IGVYYVEGGK IAANHLMKWI GIHVEDDPDE VDGTLKNVNV PESVLKSIDF 1561 VGLERALKYE FKEKGLLVEA ITHASRPSSG VSCYQRLEFV GDAVLDHLIT RHLFFTYTSL 1621 PPGRLTDLRA AAVNNENFAR VAVKHKLHLY LRHGSSALEK QIREFVKEVQ TESSKPGFNS 1681 FGLGDCKAPK VLGDIVESIA GAIFLDSGKD TTAAWKVFQP LLQPMVTPET LPMHPVRELQ 1741 ERCQQQAEGL EYKASRSGNT ATVEVFIDGV QVGVAQNPQK KMAQKLAARN ALAALKEKEI 1801 AESKEKHINN GNAGEDQGEN ENGNKKNGHQ PFTRQTLNDI CLRKNWPMPS YRCVKEGGPA 1861 HAKRFTFGVR VNTSDRGWTD ECIGEPMPSV KKAKDSAAVL LLELLNKTFS //