LOCUS AED90369.1 1155 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana BRCA2-like B protein. ACCESSION CP002688-116 PROTEIN_ID AED90369.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 26975502) AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E., Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M., Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R., Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J., Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J., Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L., Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B., Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E., Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A., Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M., See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L., Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R., Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R., Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N., Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B., Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H., Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W., Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M., Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K., Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C., Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P. CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington University in St Louis Sequencing Consortium; European Union Arabidopsis Genome Sequencing Consortium TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 823-826 (2000) PUBMED 11130714 REFERENCE 2 (bases 1 to 26975502) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 26975502) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="5" /ecotype="Columbia" protein /gene="BRCA2B" /locus_tag="AT5G01630" /gene_synonym="ATBRCA2(V)" /gene_synonym="BRCA2(V)" /gene_synonym="BRCA2-like B" /gene_synonym="F7A7.150" /gene_synonym="F7A7_150" /inference="Similar to RNA sequence, EST:INSD:EL083723.1,INSD:EH957220.1,INSD:AU227536.1, INSD:DR379270.1" /inference="similar to RNA sequence, mRNA:INSD:AJ488305.1,INSD:BT004117.1" /note="BRCA2-like B (BRCA2B); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: meiosis; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA recombination/repair protein BRCA2, helical domain (InterPro:IPR015252), DNA recombination and repair protein, BRCA2 (InterPro:IPR011370), BRCA2, oligonucleotide/oligosaccharide-binding 1 (InterPro:IPR015187), Breast cancer type 2 susceptibility protein (InterPro:IPR015525), BRCA2 repeat (InterPro:IPR002093); BEST Arabidopsis thaliana protein match is: BREAST CANCER 2 like 2A (TAIR:AT4G00020.1); Has 281 Blast hits to 210 proteins in 91 species: Archae - 0; Bacteria - 4; Metazoa - 134; Fungi - 18; Plants - 61; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink)." /db_xref="TAIR:AT5G01630" /db_xref="Araport:AT5G01630" intron_pos 52:1 (1/19) intron_pos 100:1 (2/19) intron_pos 154:1 (3/19) intron_pos 483:1 (4/19) intron_pos 525:0 (5/19) intron_pos 576:2 (6/19) intron_pos 617:2 (7/19) intron_pos 679:2 (8/19) intron_pos 707:0 (9/19) intron_pos 724:0 (10/19) intron_pos 751:1 (11/19) intron_pos 788:2 (12/19) intron_pos 812:2 (13/19) intron_pos 879:0 (14/19) intron_pos 940:0 (15/19) intron_pos 987:2 (16/19) intron_pos 1008:2 (17/19) intron_pos 1077:0 (18/19) intron_pos 1135:0 (19/19) BEGIN 1 MSTWHLFSDS SGDGFRWEVA GRILQSVSDS TPTKALESTA PLPSMADLLL QGCSKLIERE 61 ESMPGEIPMF RTGLGKSVVL KESSIAKAKS ILAENVAYSD LQNTNCSIPQ TRQVDTAETM 121 PMFRTALGKT VPLKESSIAK PLSILGSDMI IDSDNVLPRE SGFGVPNSLF QTASNKKVNV 181 SSAGLARAKA LLGLEEDDLN GFNHVNQSSS SLQQHGWSGL KTHEEFDATV VKHHSGTPGQ 241 YENYVSGKRS EILNPSLKVP PTKFQTAGGK SLSVSAEALK RARNLLGDPE LGSFFDDVAG 301 GDQFFTPQKD ERLSDIAINN GSVNTGYIAH EEKTSNKHTS NSFVSPLHSS SKQFRSVNLE 361 NLASGGNLIK KFDTAVDETN CALNISKPAT HGLSNNRPLA SDMAVNNSKG NGFIPRARQL 421 GRPADQPLVD ITNRRDTAYA NNKQDSTQKK RLGKTVSVSP FKRPRISSFK TPLKKNAQQA 481 SSGLSVVSCD TLTSKKVLST RYPEKSPRVY IKEFFGMHPT ATTRMDYVPD HVRRIKSSNA 541 DKYVFCDESS SNKVGAETFL QMLAESGASL QHASRKWVTN HYRWIVWKLA CYDIYYPAKC 601 RGNFLTITNV LEELKYRYER EVNHGHCSAI KRILSGDAPA SSMMVLCISA INPRTDNGSQ 661 EAHCSDNCSN VKVELTDGWY SMNAALDVVL TKQLNAGKLF VGQKLRILGA GLSGWATPTS 721 PLEAVISSTI CLLLNINGTY RAHWADRLGF CKEIGVPLAF NCIKCNGGPV PKTLAGITRI 781 YPILYKERLG EKKSIVRSER IESRIIQLHN QRRSALVEGI MCEYQRGING VHSQNDTDSE 841 EGAKVFKLLE TAAEPELLMA EMSLEQLTSF TTYKAKFEAA KQMQMEKSVA KALEDAGLGE 901 RNVTPFMRIR LVGLTSLSNE GEHNPKEGIV TIWDPTERQR TELTEGKIYI MKGLVPMNSD 961 SETLYLHARG SSSRWQPLSP KDSENFQPFF NPRKPISLSN LGEIPLSSEF DIAAYVVYVG 1021 DAYTDVLQKK QWVFVTDGST QHSGEISNSL LAISFSTPFM DDSSVSHISH NLVGSVVGFC 1081 NLIKRAKDAT NEMWVAETTE NSVYFINAEA AYSSHLKTRS AHIQTWAKLY SSKSVIHELR 1141 QRVLFIIGAC KSPSC //