LOCUS AED90305.1 360 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein. ACCESSION CP002688-30 PROTEIN_ID AED90305.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 26975502) AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E., Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M., Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R., Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J., Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J., Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L., Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B., Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E., Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A., Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M., See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L., Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R., Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R., Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N., Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B., Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H., Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W., Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M., Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K., Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C., Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P. CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington University in St Louis Sequencing Consortium; European Union Arabidopsis Genome Sequencing Consortium TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 823-826 (2000) PUBMED 11130714 REFERENCE 2 (bases 1 to 26975502) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 26975502) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="5" /ecotype="Columbia" protein /locus_tag="AT5G01160" /gene_synonym="F7J8.140" /gene_synonym="F7J8_140" /inference="Similar to RNA sequence, EST:INSD:BP805131.1,INSD:BP616482.1,INSD:ES178989.1, INSD:ES147662.1,INSD:DR379092.1,INSD:AI997976.1, INSD:DR282566.1,INSD:BP627307.1,INSD:EH941360.1, INSD:AV803039.1,INSD:ES146960.1,INSD:EL282499.1, INSD:DR282564.1,INSD:BP626024.1,INSD:EL988141.1, INSD:BP630593.1,INSD:EL978033.1,INSD:AV557121.1, INSD:AV818919.1,INSD:ES131828.1,INSD:DR282561.1, INSD:CB074347.1,INSD:DR282562.1,INSD:BP806571.1, INSD:AV543449.1,INSD:EL167348.1,INSD:EL240692.1, INSD:BP636377.1,INSD:EH966507.1,INSD:BP625721.1, INSD:ES155236.1,INSD:BP604314.1,INSD:DR282567.1, INSD:BP627814.1,INSD:N37320.1,INSD:AV439570.1, INSD:EH919038.1,INSD:AV556858.1,INSD:EL997994.1, INSD:DR282565.1,INSD:DR282563.1,INSD:EH811312.1" /inference="similar to RNA sequence, mRNA:INSD:BX830977.1,INSD:AY084366.1,INSD:AK227241.1, INSD:BT024744.1,INSD:BX829595.1,INSD:BX830386.1, INSD:BX831145.1,INSD:BX831309.1,INSD:BX833520.1, INSD:BX831546.1" /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink)." /db_xref="TAIR:AT5G01160" /db_xref="Araport:AT5G01160" intron_pos 86:0 (1/2) intron_pos 105:2 (2/2) BEGIN 1 MLQIRLRRDS PTETGNGARP SPTETVTVAC PDHLVLADLP VAKGIGSVTP TTVIKPVGRR 61 SRRQLGERVH FCVRCDFPIA IYGRLIPCDH AFCLECARSD SICYLCDERI QKIQTIKMME 121 GIFICAAPHC LRSFLKKLDF EAHVHDLHGS LLQADAEKED GNQSDVQSTM QQSSASESTL 181 RAPLRSQLQQ SRELNRSASF AKSQSGFSQV QNYPPDSDNS RPPGFETASP KPGIRFPDYP 241 QPMNLMQPPS LPVPMNQNPG LPQQFGFPSY PTTESGSSQQ FFNGAQYEMT RTESGGSEQS 301 SLLGYPPPSP MTNLNFQGSY PPPSWNPGMA PPHTTQQVNR GRDGQSFGWP QENRDGFGQE //