LOCUS ADU47803.1 1482 aa PRT BCT 08-JAN-2015 DEFINITION Intrasporangium calvum DSM 43043 FHA domain containing protein protein. ACCESSION CP002343-1241 PROTEIN_ID ADU47803.1 SOURCE Intrasporangium calvum DSM 43043 ORGANISM Intrasporangium calvum DSM 43043 Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium. REFERENCE 1 (bases 1 to 4024382) AUTHORS Del Rio,T.G., Chertkov,O., Yasawong,M., Lucas,S., Deshpande,S., Cheng,J.F., Detter,C., Tapia,R., Han,C., Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Rohde,M., Pukall,R., Sikorski,J., Goker,M., Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Lapidus,A. TITLE Complete genome sequence of Intrasporangium calvum type strain (7 KIP) JOURNAL Stand Genomic Sci 3 (3), 294-303 (2010) PUBMED 21304734 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 4024382) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Tapia,R., Detter,J.C., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Gehrich-Schroeter,G., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Intrasporangium calvum DSM 43043 JOURNAL Unpublished REFERENCE 3 (bases 1 to 4024382) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Chertkov,O., Brettin,T., Detter,J.C., Tapia,R., Han,C., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Gehrich-Schroeter,G., Schneider,S., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (17-NOV-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4083316 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Intrasporangium calvum 7KIP, DSM 43043 collection_date :: 1967 lat_lon :: 55.753 37.604 depth :: Missing alt_elev :: Missing country :: Russia environment :: Air num_replicons :: Missing ref_biomaterial :: DSM 43043, ATCC 23552, CUB 430, IFO 12989, IMET 7816, JCM 3097, KCC A-0097, NBRC 12989, NCIB 10167 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02320 Type Strain :: Yes Greengenes ID :: 90541 Funding Program :: DOE-GEBA 2007 Number of Reads :: 847906 pyrosequencing, 11758818 Illumina Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Air in a school dining room Isolation Comments :: isolated by L.V. Kalakoutskii Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454-FLX, 454-Titanium, Illumina GAii ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Intrasporangium calvum DSM 43043" /mol_type="genomic DNA" /strain="DSM 43043" /isolation_source="air in a school dining room" /culture_collection="DSM:43043" /type_material="type strain of Intrasporangium calvum" /db_xref="taxon:710696" /country="Russia" /lat_lon="55.753 N 37.604 E" /collection_date="1967" /collected_by="L.V. Kalakoutskii" protein /locus_tag="Intca_1285" /note="COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR019793: IPR000253: IPR002543: IPR003593; KEGG: tcu:Tcur_4147 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; Forkhead-associated protein; SMART: Forkhead-associated protein; AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family; FHA domain" /transl_table=11 BEGIN 1 MRLRMGLVDP STARVRDVVI DTDENGDTPG EHPVTFKEVR PRLAELLHRR PGTFFIDGHP 61 VTDEAVLGEG RLIRGALLRA DDEARDAAPG EVLPPGLVQV HVVGGPGAGR VIHLARGEHV 121 VGRATSSGVR LDDHGVSRAH ASITIDDAGI RLRELEATNP TYVDEARVPP DGAALSVGDR 181 IRVASTTLVL RRPDTTPAAS ECSRGSVRVN RRPRFTPHTE PVTIRFPERP TRPPATRAPV 241 LAALAPLAIS VALAAALRSP VMLLFALMSP VMLLTQWWGD RRHGRVSHRS QLADHARLTA 301 EAESLLDDAL AAEREARHDE QPDLALVASV ATHRDARLWE RRTGDTDHLV LRVGTARQAA 361 RTRVEAPDES RADPTVPDVP VVLDLGVGVI GVAGPRARTR AAVSSLVAQA SVWHSPRSTR 421 VVIISAAPDA ERDWAWATWL PHAAGPPSGP VALVASVDDE AAVVARVAEL LTVIDSRTRP 481 ANGVGVQARA VPRFLVVLDG AAELRGRAGI AAILEAAPSA GVHVVALDET AERLPAECRA 541 QLVLDEGPAP RAELHLDDAT IRDIVPDLPH PAWVGSLARS LAPLEDVTPE TGSSALPDAI 601 TLAAAHALTG HEPTQAPVLV QLWSTSDGRP RAVLGVAQDG PFVVDLAQDG PHCLVGGTTG 661 SGKSELLQTL VVGLAVSTPP DELAFVLVDY KGGSAFKECA QLPHCLGVVT DLDEHLTRRA 721 LESLGAEVKR REALLAEAGA KDLDDYRRVR SQRGELEPLA RLVIVVDEFK MLADELPDFV 781 DGLVRIAAVG RSLGVHLVLA TQRPAGIITG DMRANVSLRI ALRVRDRSDS DDVIESPVAA 841 AVSDQTPGRA WVRTGGGRLS EVQTAFAGAS TSPCRPTQPH LVSVRELTWA DLARPLTVDR 901 PAGADTGSSE LQAVVAAAKQ AAAALGVVGP PSPWLPPLPA SLSRSTLTGD RPAGAVALGL 961 EDAPALQAQM PYTWHPVSDG NLAIAGGART GRTTTARALA VGLAEHWPPT QLHLHVIEGT 1021 PGSLRDLASL PHVGSVTSTA DPALAARVIA RLTDATTRGH QLPDDPAGTG SPTTSDDRRC 1081 HTVLLVDGWE SVEDAFEAVD HGAPAEALLR LARDGMAAGL RLVVTGGRGL ISGRVSSLVQ 1141 HRLVLPMTDP IDLTLAGLSP ELAQGHHGVG RAIDVATGHQ VQLAHVGADP ESGAQVRTTV 1201 AVAERLRAGL WRDSAVGAAG AAGGLPWRVA PLPHAVAWND LPPAGPDWLV LGLGGDDARP 1261 LGFEAGWVGR RALVVGGPRS GRSTVLATMA RQLADAGRPT VVVATRRTPL SWLAGTPQFH 1321 LVSAQDGGRL RQLREAHPDL SVLVDDAEGL DGSPAEPVVL EVAHDLGHPS SWCVAAVDAR 1381 RAASLYRGVV PELARHATGV VLSPVSPNDG DVLGIRVEIA RHRLPGRGVI VLDGATLPIQ 1441 VADPRLPPDP RSDLGRSTKD RADTGCSPPG DSVPPGPVPR DR //