LOCUS       ADD42543.1               293 aa    PRT              BCT 08-JAN-2015
DEFINITION  Stackebrandtia nassauensis DSM 44728 Bile acid:sodium
            symporter protein.
ACCESSION   CP001778-2820
PROTEIN_ID  ADD42543.1
SOURCE      Stackebrandtia nassauensis DSM 44728
  ORGANISM  Stackebrandtia nassauensis DSM 44728
            Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae;
            Stackebrandtia.
REFERENCE   1  (bases 1 to 6841557)
  AUTHORS   Munk,C., Lapidus,A., Copeland,A., Jando,M., Mayilraj,S., Glavina
            Del Rio,T., Nolan,M., Chen,F., Lucas,S., Tice,H., Cheng,J.F.,
            Han,C., Detter,J.C., Bruce,D., Goodwin,L., Chain,P., Pitluck,S.,
            Goker,M., Ovchinikova,G., Pati,A., Ivanova,N., Mavromatis,K.,
            Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J.,
            Jeffries,C.D., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,
            Kyrpides,N.C. and Klenk,H.P.
  TITLE     Complete genome sequence of Stackebrandtia nassauensis type strain
            (LLR-40K-21T)
  JOURNAL   Stand Genomic Sci 1 (3), 234-241 (2009)
   PUBMED   21304662
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6841557)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Ovchinnikova,G., Munk,A.C., Brettin,T.,
            Detter,J.C., Han,C., Tapia,R., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Jando,M., Mayilraj,S., Goker,M., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Stackebrandtia nassauensis DSM 44728
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 6841557)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Ovchinnikova,G., Munk,A.C., Brettin,T.,
            Detter,J.C., Han,C., Tapia,R., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Jando,M., Mayilraj,S., Goker,M., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2009) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4082381
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Stackebrandtia nassauensis LLR-40K-21, DSM
                                     44728
            Culture Collection ID :: DSM 44728
            GOLD Stamp ID         :: Gc01107
            Funding Program       :: DOE-GEBA 2007
            Number of Reads       :: 81931 Sanger, 851638 pyrosequence
            Assembly Method       :: Newbler version 1.1.02.15, Phrap
            Sequencing Depth      :: 11x Sanger; 29x 454
            Gene Calling Method   :: Prodigal 1.4, GenePRIMP
            Isolation Site        :: Soil sample from Nassau Bahamas
            Isolation Country     :: Bahamas
            Latitude              :: 25.066127
            Longitude             :: -77.339025
            Oxygen Requirement    :: Aerobe
            Motility              :: Nonmotile
            Sporulation           :: Nonsporulating
            Temperature Range     :: Mesophile
            Temperature Optimum   :: 28C
            Gram Staining         :: gram+
            Biotic Relationship   :: Free living
            Diseases              :: None
            Habitat               :: Soil
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Stackebrandtia nassauensis DSM 44728"
                     /mol_type="genomic DNA"
                     /strain="DSM 44728"
                     /isolation_source="soil"
                     /culture_collection="DSM:44728"
                     /type_material="type strain of Stackebrandtia nassauensis"
                     /db_xref="taxon:446470"
                     /country="Bahamas: Nassau"
     protein         /locus_tag="Snas_2868"
                     /inference="protein motif:PFAM:PF01758"
                     /note="PFAM: Bile acid:sodium symporter; KEGG:
                     pag:PLES_36771 putative transporter"
                     /transl_table=11
                     /db_xref="InterPro:IPR002657"
BEGIN
        1 MDTVLIEVFL PIALAIIMFG LGLGLTTADF ARVARYPRAA AAALGCQILL LPAACFGLVL
       61 LFELPPVLAV GMMLLAASPG GTTANLYSHL FGGDVALNIT LTAINSVVAV VTLPLVTNLA
      121 LTYFVADGGT LGLQFGKTLQ IFAIVLVPVV LGMLVKRRSP GFAARLSRPV KIASAIILVL
      181 VIAGAIATEW ANLGGYIRSV GAITVLFSVL SLTVGYWVPR LLKVERRQAI ASCMEIGIHN
      241 STLAITIALS PALLGNVEMS IPAALYGLVM FFTAAGAGFL ARRGVKDEPV KAA
//