LOCUS ACV55454.1 1228 aa PRT BCT 11-DEC-2013 DEFINITION Eggerthella lenta DSM 2243 ABC transporter related protein. ACCESSION CP001726-1459 PROTEIN_ID ACV55454.1 SOURCE Eggerthella lenta DSM 2243 ORGANISM Eggerthella lenta DSM 2243 Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella. REFERENCE 1 (bases 1 to 3632260) AUTHORS Saunders,E., Pukall,R., Abt,B., Lapidus,A., Glavina Del Rio,T., Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P., Meincke,L., Sims,D., Brettin,T., Detter,J.C., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Han,C. TITLE Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255) JOURNAL Stand Genomic Sci 1 (2), 174-182 (2009) PUBMED 21304654 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Eggerthella lenta DSM 2243 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (02-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082980 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Eggerthella lenta VPI 0255, DSM 2243 Culture Collection ID :: DSM 2243, ATCC 25559, JCM 9979 GOLD Stamp ID :: Gc01054 Funding Program :: DOE-GEBA 2007 Number of Reads :: 39464-Sanger, 471609-454 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 10.2x Sanger; 25.3x 454 Gene Calling Method :: Prodigal Isolation Site :: Rectal tumor Collection Date :: 1938 Host Name :: Homo sapiens Host Health :: Patient with rectal tumor Body Sample Site :: Blood Oxygen Requirement :: Anaerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: Bacteremia Habitat :: Blood, Host, Human intestinal microflora Phenotypes :: Pathogen ##Metadata-END## FEATURES Qualifiers source /organism="Eggerthella lenta DSM 2243" /mol_type="genomic DNA" /strain="DSM 2243" /culture_collection="DSM:2243" /type_material="type strain of Eggerthella lenta" /db_xref="taxon:479437" protein /locus_tag="Elen_1486" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pde:Pden_1425 ABC transporter related" /transl_table=11 /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR017940" BEGIN 1 MSKESKGRKP GALSRCLRFA GRRKPLVFAS MALAVLSAAA SFVPYVAIYF MIRDAVGVYP 61 NLAAVDVSAM TGYAGLAVAG IVVDVGCYLA ALLCSHAAAF DAQYRTKLDI AAHLGRIPLG 121 HIARLGTGRI SKVMDESVGG IEQFIGHSIP DLAATAAAPV VLAALLFVFD WRFGVATLAA 181 VAVACVVQFS GYADKRVMAS MGRYQEVKEQ MGNASVEYVR GMRVVKAFGQ TARSFKRLSD 241 AIKDYTGLSL DVTLFFRNSM PGFTAVLNNA YLFVLPVGIL LAPGAQDWPT FVLSLVFYLL 301 FVHSISSVFT KILYVSEDGM LAQANIDRID SVLGIEELSC PEAPKAPKDA SVSLRDVTFS 361 YEDDAEPALR NVSLEIPAGT VCAVVGPSGS GKSTLANLVA RFWDVDSGQV LVGGVDVREM 421 GQDELMGSLS LVFQDSHLFR ESVAENIRRG RPGATDDEVV EAAKAAQADA FINGLPHGYA 481 TVIGSEGVHL SGGEQQRIAI ARSIISDAPI VVLDEATAFS DPENEHLIQK AFERLMAGKT 541 VIMVAHRLST VVGADKIVVL DGGRKVEEGT HQELLAASGT YAKMWRQYTE AVEWGIEAAP 601 RDDTRSSEAT APHATQGVSA EEYDPAEKPG KPSSGRAPWL QRTFNLSDEG YVGLKRSAIA 661 CTLSDLALMI PFVCTVAAFA ALVGTLAGEP FDAAALWSIF AVGLAGMVVV FVASRNDYKK 721 TYVAAYTESE GTRLRLADHL RKLPMSFFNR RDTTDVADRI MGDVTAQESM LSSTLPQLIA 781 GIVSTVVICA MLAFFDWRLA CCVMVTLPLS AGVIALSRRH QSRLFERQNR VRLDALACVQ 841 DYLEGIKDMR ACRAVGKDSA AMEQAMLELK RVTMRVELAV DVSVSLASAI LRSGVGLTAC 901 VGAVLLASGG VDFMVLLMFL LIVSRVYGPI LALVSQLPNL LNLSTKTARI KAVMDEPEAR 961 GSASADVPGH DLSFQGVRFG YGDEEVLHGV SFVAREGEVT ALVGPSGSGK STCAQLAAKF 1021 WEPDSGRVLC SGKDIAEFSE ESWLAHVSIV FQDVVLFDDT VANNIRIGRE GASDEEVAEA 1081 ARAAHCLEFI ERLPQGFDTV LGENGASLSG GERQRLSIAR ALLKDAPVVL LDEATASLDP 1141 ENETLIQRAV GTLCAGKTVI VIAHRLRTVA NADKIVVLDS GRVAEEGNHK TLLAEDGLYA 1201 RLWRLQQESS SWTVPADRGD AADVPTGR //