LOCUS ACV54012.1 1020 aa PRT BCT 11-DEC-2013 DEFINITION Eggerthella lenta DSM 2243 hypothetical protein protein. ACCESSION CP001726-17 PROTEIN_ID ACV54012.1 SOURCE Eggerthella lenta DSM 2243 ORGANISM Eggerthella lenta DSM 2243 Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella. REFERENCE 1 (bases 1 to 3632260) AUTHORS Saunders,E., Pukall,R., Abt,B., Lapidus,A., Glavina Del Rio,T., Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P., Meincke,L., Sims,D., Brettin,T., Detter,J.C., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Han,C. TITLE Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255) JOURNAL Stand Genomic Sci 1 (2), 174-182 (2009) PUBMED 21304654 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Eggerthella lenta DSM 2243 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (02-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082980 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Eggerthella lenta VPI 0255, DSM 2243 Culture Collection ID :: DSM 2243, ATCC 25559, JCM 9979 GOLD Stamp ID :: Gc01054 Funding Program :: DOE-GEBA 2007 Number of Reads :: 39464-Sanger, 471609-454 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 10.2x Sanger; 25.3x 454 Gene Calling Method :: Prodigal Isolation Site :: Rectal tumor Collection Date :: 1938 Host Name :: Homo sapiens Host Health :: Patient with rectal tumor Body Sample Site :: Blood Oxygen Requirement :: Anaerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: Bacteremia Habitat :: Blood, Host, Human intestinal microflora Phenotypes :: Pathogen ##Metadata-END## FEATURES Qualifiers source /organism="Eggerthella lenta DSM 2243" /mol_type="genomic DNA" /strain="DSM 2243" /culture_collection="DSM:2243" /type_material="type strain of Eggerthella lenta" /db_xref="taxon:479437" protein /locus_tag="Elen_0018" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: mag:amb3422 hypothetical protein" /transl_table=11 /db_xref="InterPro:IPR003006" BEGIN 1 MEYAEQYIAL CLGGAGSASA PAPGIVLDGT APFTLDMMVR GIPVESAASV LHQEGALDVR 61 LTAKGFSFWR EGFGIFSTSS DGETFQQGEW NHLCIAYEPG TVRLFVNGAL DCVVQKPCKG 121 SACPKPFVVG AGVKGGVRQL RLFDRAFGGM EVQDLLLMDF ADIRASSYAG SLAAFYDFGC 181 KAPVERVSGS TIALQGDAKM RALFPSVQLR GSAYLAISNE PGINPAGRRN DAYSIQAWIR 241 LEPFDGQDAY TVFANGDLSE EAGMSLYVAR DEASWRLCAL RGDEEPMISK GLVQPQLWTN 301 VCLTYDGLQT QSLYVDGVLD SQISTCLPIS DVLEEPKLRI GADLSNGSDN GKDCFSGAIS 361 RVDVWNRALT AEEVKSYAAE EPSFDAEGLQ ASYDLSFADI NNAVSSDPIG LRNGVVVDDV 421 RQEAGTTPMP TACPPKPDPL SDEELRRCRA ACLKGNDSSP LRVSRLEKDG YVCFVGHYHD 481 GSQTIACAKE GYDEWTLWYI ELVLLLVGGV LTVLAGVRIA GGNKITNFIV TKIMPNPAFR 541 SLFSGPVSFK TIITFFYLLK ANGLLTPLLK AAMSGLRWFK VAWSIAVMTT MAVAICTGMG 601 LIYYAAAFAD LAVSLIVHLA DMPASGTLLP CGVSALFFDH HAVTSTVPLP TGEADAIALA 661 WNGTQLVSKP EWDSSKSDPC AYCIEAVKGK KITIKANLTC SDPSLASVKV RAVDKSRSTL 721 LGDSDEIAVT FRYGRASGAT LAFPRHALAN KGVGKHELQL EWQCYYQGGW KKMSTTKHVM 781 YTLLSYPNEP WLSRNGSSQY PWVSLLEKAC SWASGKKTPA EAAGTIERKV NEGLGLEYDT 841 SGWGRSYYCT NTGYFLLGNF LRQTSSLVNC TDCAIIVTTF ANALGCDLHE ARMEDPSPSN 901 KQQFTFLKVK SIGKKVWQDG RFTYHEVAVS RKAATTNNQD RAVYDACCTL NGSDTPSSAS 961 KRDPVLSNGM NFSDFDDTEP IPRTITARSS YREHFATNDA AGVGRCAYVW SSETRRPAMP //