LOCUS ACS93418.1 1370 aa PRT VRL 09-MAY-2013 DEFINITION Human betaherpesvirus 5 major capsid protein protein. ACCESSION GQ221974-82 PROTEIN_ID ACS93418.1 SOURCE Human betaherpesvirus 5 (HHV-5) ORGANISM Human betaherpesvirus 5 Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus humanbeta5. REFERENCE 1 (bases 1 to 235154) AUTHORS Davison,A.J., Akter,P., Cunningham,C., Dolan,A., Addison,C., Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D. and Wilkinson,G.W. TITLE Homology between the human cytomegalovirus RL11 gene family and human adenovirus E3 genes JOURNAL J. Gen. Virol. 84 (PT 3), 657-663 (2003) PUBMED 12604818 REFERENCE 2 (bases 1 to 235154) AUTHORS Akter,P., Cunningham,C., McSharry,B.P., Dolan,A., Addison,C., Dargan,D.J., Hassan-Walker,A.F., Emery,V.C., Griffiths,P.D., Wilkinson,G.W. and Davison,A.J. TITLE Two novel spliced genes in human cytomegalovirus JOURNAL J. Gen. Virol. 84 (PT 5), 1117-1122 (2003) PUBMED 12692276 REFERENCE 3 (bases 1 to 235154) AUTHORS Dolan,A., Cunningham,C., Hector,R.D., Hassan-Walker,A.F., Lee,L., Addison,C., Dargan,D.J., McGeoch,D.J., Gatherer,D., Emery,V.C., Griffiths,P.D., Sinzger,C., McSharry,B.P., Wilkinson,G.W. and Davison,A.J. TITLE Genetic content of wild-type human cytomegalovirus JOURNAL J. Gen. Virol. 85 (PT 5), 1301-1312 (2004) PUBMED 15105547 REFERENCE 4 (bases 1 to 235154) AUTHORS Griffin,C., Wang,E.C., McSharry,B.P., Rickards,C., Browne,H., Wilkinson,G.W. and Tomasec,P. TITLE Characterization of a highly glycosylated form of the human cytomegalovirus HLA class I homologue gpUL18 JOURNAL J. Gen. Virol. 86 (PT 11), 2999-3008 (2005) PUBMED 16227221 REFERENCE 5 (bases 1 to 235154) AUTHORS Cunningham,C., Gatherer,D., Hilfrich,B., Baluchova,K., Dargan,D.J., Thomson,M., Griffiths,P.D., Wilkinson,G.W., Schulz,T.F. and Davison,A.J. TITLE Sequences of complete human cytomegalovirus genomes from infected cell cultures and clinical specimens JOURNAL J. Gen. Virol. 91 (PT 3), 605-615 (2010) PUBMED 19906940 REFERENCE 6 (bases 1 to 235154) AUTHORS Davison,A.J. TITLE Direct Submission JOURNAL Submitted (28-MAY-2009) MRC Virology Unit, Church Street, Glasgow G11 5JR, UK COMMENT On or before Aug 17, 2009 this sequence version replaced AY446863.1, AY446867.1, AY446875.1, AY169795.2, AY156040.1, AY325311.1, DQ195526.1. The original gene nomenclature has been retained. Genes presumably inherited from the common ancestor of alpha-, beta- and gammaherpesviruses (core genes), from the common ancestor of beta- and gammaherpesviruses (betagamma genes), or from the common ancestor of betaherpesviruses (beta genes) are indicated. A standard protein nomenclature has been applied so that orthologs have the same name in all herpesviruses. FEATURES Qualifiers source /organism="Human betaherpesvirus 5" /mol_type="genomic DNA" /strain="3157" /isolation_source="urine from a congenitally infected infant" /host="Homo sapiens" /db_xref="taxon:10359" /country="United Kingdom" /collection_date="2001" /note="sequenced at passage 3 in human fibroblasts; three genes are mutated (RL13, UL40 and UL128); acronym: HCMV; acronym: HHV-5" protein /gene="UL86" /note="6 copies form hexons, 5 copies form pentons; involved in capsid morphogenesis" BEGIN 1 MENWSALELL PKVGIPTDFL THVKTSAGEE MFEALRIYYG DDPERYNIHF EAIFGTFCNR 61 LEWVYFLTSG LAAAAHAIKF HDLNKLTTGK MLFHVQVPRV ASGAGLPTSR QTTIMVTKYS 121 EKSPITIPFE LSAACLTYLR ETFEGTILDK ILNVEAMHTV LRALKNTADA MERGLIHSFL 181 QTLLRKAPPY FVVQTLVENA TLARQALNRI QRSNILQSFK AKMLATLFLL NRTRDRDYVL 241 KFLTRLAEAA TDSILDNPTT YTTSSGAKIS GVMVSTANVM QIIMSLLSSH ITKETVSAPA 301 TYGNFVLSPE NAVTAISYHS ILADFNSYKA HLTSGQPHLP NDSLSQAGAH SLTPLSMDVI 361 RLGEKTVIME NLRRVYKNTD TKDPLERNVD LTFFFPVGLY LPEDRGYTTV ESKVKLNDTV 421 RNALPTTAYL LNRDRAVQKI DFVDALKTLC HPVLHEPAPC LQTFTERGPP SEPAMQRLLE 481 CRFQQEPMGG AARRIPHFYR VRREVPRTVN EIKQDFVVTD FYKVGNITLY TELHPFFDFT 541 HCQENSETVA LCTPRIVIGN LPDGLAPGPF HELRTWEIME HMRLRPPPDY EETLRLFKTT 601 VTSPNYPELC YLVDVLVHGN VDAFLLIRTF VARCIVNMFH TRQLLVFAHS YALVTLIAEH 661 LADGALPPQL LFHYRNLVAV LRLVTRISAL PGLNNGQLAE EPLSAYVNAL HDHRLWPPFV 721 THLPRNMEGV QVVADRQPLN PANIEARHHG VSDVPRLGAM DADEPLFVDD YRATDDEWTL 781 QKVFYLCLMP AMTNNRACGL GLNLKTLLVD LFYRPAFLLM PAATAVSTSG TTSKESTSGV 841 TPEDSIAAQR QAVGEMLTEL VEDVATDAHT PLLQACRELF LAVQFVGEHV KVLEVRAPLD 901 HAQRQGLPDF ISRQHVLYNG CCVVTAPKTL IEYSLPVPFH RFYSNPTICA ALSDDIKRYV 961 TEFPHYHRHD GGFPLPTAFA HEYHNWLRSP FSRYSATCPN VLHSVMTLAA MLYKISPVSL 1021 VLQTKAHIHP GFALTAVRTD TFEVDMLLYS GKSCTSVIIN NPIVTKEERD ISTTYHVTQN 1081 INTVDMGLGY TSNTCVAYVN RVRTDMGVRV QDLFRVFPMN VYRHDEVDRW IRHAAGVERP 1141 QLLDTETISM LTFGSMSERN AAATVHGQKA ACELILTPVT IDVNYFKIPN NPRGRASCML 1201 AVDPYDTEAA TKAIYDHREA DAQTFAATHN PWASQAGCLS DVLYNTRHRE RLGYNSKFYS 1261 PCAQYFNTEE IIAANKTLFK TIDEYLLRAK DCIRGDTDTQ YVCVEGTEQL IENPCRLTQE 1321 ALPILSTTTL ALMETKLKGG AGAFATSETH FGNYVVGEII PLQQSMLFNS //