LOCUS ACM58264.1 786 aa PRT BCT 01-MAR-2021 DEFINITION Halorubrum lacusprofundi ATCC 49239 amino acid permease- associated region protein. ACCESSION CP001365-2658 PROTEIN_ID ACM58264.1 SOURCE Halorubrum lacusprofundi ATCC 49239 ORGANISM Halorubrum lacusprofundi ATCC 49239 Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum. REFERENCE 1 (bases 1 to 2735295) AUTHORS Dassarma,S., Capes,M.D., Karan,R. and Dassarma,P. TITLE Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica JOURNAL PLoS One 8 (3), e58587 (2013) PUBMED 23536799 REFERENCE 2 (bases 1 to 2735295) AUTHORS Karan,R., Capes,M.D., DasSarma,P. and DasSarma,S. TITLE Cloning, overexpression, purification, and characterization of a polyextremophilic beta-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi JOURNAL BMC Biotechnol 13, 3 (2013) PUBMED 23320757 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2735295) AUTHORS Anderson,I.J., DasSarma,P., Lucas,S., Copeland,A., Lapidus,A., Del Rio,T.G., Tice,H., Dalin,E., Bruce,D.C., Goodwin,L., Pitluck,S., Sims,D., Brettin,T.S., Detter,J.C., Han,C.S., Larimer,F., Hauser,L., Land,M., Ivanova,N., Richardson,P., Cavicchioli,R., DasSarma,S., Woese,C.R. and Kyrpides,N.C. TITLE Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 JOURNAL Stand Genomic Sci 11 (1), 70 (2016) PUBMED 27617060 REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 2735295) AUTHORS Laye,V.J., Karan,R., Kim,J.M., Pecher,W.T., DasSarma,P. and DasSarma,S. TITLE Key amino acid residues conferring enhanced enzyme activity at cold temperatures in an Antarctic polyextremophilic beta-galactosidase JOURNAL Proc Natl Acad Sci U S A 114 (47), 12530-12535 (2017) PUBMED 29109294 REFERENCE 5 (bases 1 to 2735295) AUTHORS Laye,V.J. and DasSarma,S. TITLE An Antarctic Extreme Halophile and Its Polyextremophilic Enzyme: Effects of Perchlorate Salts JOURNAL Astrobiology 18 (4), 412-418 (2018) PUBMED 29189043 REFERENCE 6 (bases 1 to 2735295) AUTHORS DasSarma,S., DasSarma,P., Laye,V.J. and Schwieterman,E.W. TITLE Extremophilic models for astrobiology: haloarchaeal survival strategies and pigments for remote sensing JOURNAL Extremophiles 24 (1), 31-41 (2020) PUBMED 31463573 REFERENCE 7 (bases 1 to 2735295) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Sims,D., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Anderson,I., DasSarma,S., Cavicchioli,R. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-JAN-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4001421 Source DNA available from Professor Shiladitya DasSarma Archaea available from ATCC: ATCC 49239 Contacts: Ricardo Cavicchioli (r.cavicchioli@unsw.edu.au) Shiladitya DasSarma (sdassarma@som.umaryland.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Halorubrum lacusprofundi ATCC 49239" /mol_type="genomic DNA" /strain="ATCC 49239" /culture_collection="ATCC:49239" /type_material="type strain of Halorubrum lacusprofundi" /db_xref="taxon:416348" /chromosome="1" protein /locus_tag="Hlac_2693" /inference="protein motif:PFAM:PF00324" /note="PFAM: Spore germination protein; amino acid permease-associated region; UspA domain protein; KEGG: hma:rrnAC0759 cationic amino acid transporter" /transl_table=11 /db_xref="InterPro:IPR004761" /db_xref="InterPro:IPR004841" /db_xref="InterPro:IPR006016" BEGIN 1 MSGDGELAKD LGPLAALTIG IGTMIGAGIF VLPGTAVARA GPLAALTFVL GGVIALFTAL 61 SASELGTAMP KSGGAYFYVN RALGPMFGSV AGWANWLGLA FASAFYMYGF GEYVNALVGL 121 DPVGLGPVTL EAAQVIGLAG ALLFIAVNYF GAKETGGIQI VIVMSLLGIL AVFTVVGLLN 181 ADMESLRPIA PPGTTSQVLP VTGIIFVSYL GFVQITSVAE EIKDPGRNLP LAVLGSVVIV 241 TVVYALFLVV LLAAVPTELV ANNETAVVDA ARLLFGNYSV FGYSLGAVGA GMLLIGGLLA 301 TASSANASIL SSSRINFAMG REKIVTPKLN QIHDRFGTPY KSIALTGALI LVFLVAGGVE 361 SLSTMGSVLH LIVYGLLNIA LIVMRESEVE GYDPDFEVPF YPIVPIIGTL SSFALIVYIE 421 PRIIALSAGL VAFAVLWYLL YARGKVESRG VLGAWILDRS DDLPKAAVSA ATSVQPSGDD 481 YRVMVPLANP ATEEHLITLA SAIAKQRNGT VVAVNIANVP DQTSLEAARD RGAHEAAHDL 541 LDKARDDAET FGVDVETHVV LSHRVFEEVF DAARTYGADL TVMGWGEDSH GAPGRAESAV 601 DELAHSLPSD FLVFRDRGFD ASRILVPTAG GPASDLSGAV ARMLQAEFGG EVTLLHVADD 661 EAEGRAFLSE WADQHGLSDA TLRIESGDVE ASIERAARDA TMLIVGATEK GLLSRLVSGS 721 LVLDVLNEVE CSVLLAEKRG DRGIVGRLFG SGTRSNDIVE TDETPADTGV TPEPSTPEID 781 DSDAEK //