LOCUS       ABO50080.1               971 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 diguanylate cyclase with
            PAS/PAC sensor protein.
ACCESSION   CP000612-1528
PROTEIN_ID  ABO50080.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_1552"
                     /note="KEGG: swo:Swol_0011 putative PAS/PAC sensor
                     protein; TIGRFAM: PAS sensor protein; diguanylate cyclase;
                     PFAM: GGDEF domain containing protein; histidine kinase,
                     HAMP region domain protein; metal-dependent
                     phosphohydrolase, HD sub domain; CHASE4 domain protein;
                     PAS fold-3 domain protein; PAS fold-4 domain protein; PAS
                     fold domain protein; SMART: PAS domain containing protein;
                     metal-dependent phosphohydrolase, HD region"
                     /transl_table=11
                     /db_xref="InterPro:IPR000014"
                     /db_xref="InterPro:IPR000160"
                     /db_xref="InterPro:IPR000700"
                     /db_xref="InterPro:IPR003607"
                     /db_xref="InterPro:IPR003660"
                     /db_xref="InterPro:IPR006674"
                     /db_xref="InterPro:IPR007892"
                     /db_xref="InterPro:IPR013655"
                     /db_xref="InterPro:IPR013656"
                     /db_xref="InterPro:IPR013767"
BEGIN
        1 MTLSKKTKLI IYMTFIIFII VIFGTSEFIV RKNLSELEEK VVNQNIERVR NVLSEDISSL
       61 NKLAMDWASW DDTYSFIQDA NKAYIQSNLD DTTFIDQRLN IVLFINSSGR IVYGKGFDLE
      121 DDKEVSVPNS IKQYVSANSL LTRHSTIENG ISGVILLPEG PMLISSRPIL TTKNKGPIRG
      181 MLLMGRYLDT KQIKHLSQIV DLSLTIRDIK PTEMPPDFQE VLPLLKENPV FVSPLNSDFI
      241 AGYTLLNDVF GKPSLMLKVS MPRENYRTGQ EAMFYVLILL VVTGFLVSRF IQHVLDKVIL
      301 SRLTKLSVSV DSIGENGNLS GRVPMMKGQD EFSNLADNIN GMLAALEQSH KSAKRYRKLV
      361 NKMSTAHQQL QNIIEFLPDA TFVIDNDKKV IAWNLAIEKI TGINKKDIIG KGDYAYSVPL
      421 YGKQIPMLID LIGSEDREAE GKYEYVKRKG NTMFAEVFAP SFFGGKGAFL WGTASPLYDT
      481 KGNLVGAIES IRDITERKKI EKELNLQKAY FEQLFKNSPA GIVMLDNSDR IVKINRGFEK
      541 LFQYSISEVK GCYINQVIIP EKLLEEASIL SNVVLTGEIC QKETIRKRKD GSLVDVHILG
      601 YPILVNNQQV GIYIIYTDIT ERKQDEKRLK HISLHDALTG LYNRAYFEQE MTRLEKGRNN
      661 SVGIIMCDVD GLKLVNDTLG HNRGDELLLA ATDVIRGSFR QSDMVARIGG DEFAILLTNS
      721 DSTEVERAAQ RIKDAIAKYN KGNPKLPLNI SIGFAVSNDL SLRMWDLFRE ADNNMYREKL
      781 YHSQSARSTI VQTLMKALEA RDFITEGHAD RLQDLVVRVA RAIGLSENKV TDLRLLAKFH
      841 DIGKVGIPDR ILFSEGPLTP EEFIEMQRHC EIGYRIAQSA PDLIPIADWI LKHHEWWNGK
      901 GYPFGLKEKE IPLECRILTI ADAYDAMTSE RPYRKAMSHE EAVVELRKFA GVQFDPQLVG
      961 KFIEVFNTKK T
//