LOCUS       ABE40086.1              1151 aa    PRT              BCT 28-JAN-2014
DEFINITION  Rhodopseudomonas palustris BisB5 DNA polymerase III, alpha
            subunit protein.
ACCESSION   CP000283-2846
PROTEIN_ID  ABE40086.1
SOURCE      Rhodopseudomonas palustris BisB5
  ORGANISM  Rhodopseudomonas palustris BisB5
            Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
            Nitrobacteraceae; Rhodopseudomonas.
REFERENCE   1  (bases 1 to 4892717)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
            Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
            Oda,Y., Harwood,C.S. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Rhodopseudomonas palustris BisB5
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4892717)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
            Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
            Oda,Y., Harwood,C.S. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000372
            Source DNA and bacteria available from Caroline S. Harwood
            (csh5@u.washington.edu)
            Contacts: Caroline S. Harwood (csh5@u.washington.edu)
                      Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LLNL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. it is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Rhodopseudomonas palustris BisB5"
                     /mol_type="genomic DNA"
                     /strain="BisB5"
                     /db_xref="taxon:316057"
     protein         /locus_tag="RPD_2858"
                     /EC_number="2.7.7.7"
                     /transl_table=11
                     /db_xref="InterPro:IPR003141"
                     /db_xref="InterPro:IPR004013"
                     /db_xref="InterPro:IPR004365"
                     /db_xref="InterPro:IPR004805"
                     /db_xref="InterPro:IPR011708"
BEGIN
        1 MSNAGFVHLH VHSAYSLLKG SMKIARLAEL AKADHQPALA LTDTDNMFGA LEFSDKLAGS
       61 GIQPIVGLEL GIDFGDQDPN SRNTAVAAPS RIVLLATRER GYRSLMRLNS RAFLETPVNQ
      121 PPHIKFDWLD GETEDVIALT GGPDGPISLA MLTDPALGRL RCERLAQAFG DRLYVELQRH
      181 NTDFERRAEA GLIDVAYDMG LPLVATNEPH FATSDDFEAH DALLCIASGK LIAETDRVQL
      241 TPDHRFKTRA EMAVLFADLP EALASTVEIA QRCAYRPLTR KPILPLFTVG ASVNDAEEAA
      301 AAEAAELRRQ AEQGLADRMR IHGLSQGMSE EDYRKRLAFE LDVITRMKYA GYFLIVSDFI
      361 KWAKAHGIPV GPGRGSGAGS LVAYSLTITD LDPIRFGLLF ERFLNPERVS MPDFDIDFCQ
      421 DRRGEVIEYV QQRYGRDQVA QIITFGTLQA RGVLRDVGRV LQMPYGQVDK LTKLVPQNPA
      481 APVSLKQAIE SEPKLQAFRD EDPVVARAFD IAQKLEGLTR HASTHAAGIV IGDRPLSDLV
      541 PMYRDPKSDM PVTQFNMKWV EPAGLVKFDF LGLKTLTVLD VAVKLLKQRN IHIDLATLGI
      601 EDAPSYQMLA RGDVVGVFQV ESQGMRRALV DMRPDRFEDI IALVALYRPG PMANIPTYCA
      661 RKHGDEEPEY LHPMLEPILK ETFGVIIYQE QVMQIAQVMA GYSLGEADLL RRAMGKKIRA
      721 EMEKQRAIFV EGATRNGVPK DAADTIFDLL AKFADYGFNK SHAAAYALVS YHTAYMKAHY
      781 PVEFIAASMT LDLNNTDKLS EFRAEAQRLG IKVEAPSVNR SGPTFEVGEN TIYYALAGLK
      841 GVGQHAVQMI VEARGDKPFS SLADFAARVN PRAINKRVIE SLAAAGAFDC LDPNRARVFA
      901 GADAIIAACQ RSHEAATSGQ NDMFGGLADA PSIVLPQVEP WLPAERLRRE YDAIGFFLSG
      961 HPLDDYATAL KRLRVQSWSD FCKAVKSGAT AGKVAATVVS RMERRTKTGN KMGIMGLSDP
     1021 TGHFEAVLFS EGLAQYREVL EPGAAVLLQL GAELQGEDVR ARVLHAEPLD AAAAKTQKGL
     1081 RIFLRDTKPL DSISKRLQPP ETKVAGGNIA LVLRLDPQTE VEFEIPGRFQ VSPQIAGAIK
     1141 AVIGVEHVET L
//