LOCUS       AAL19327.1               978 aa    PRT              BCT 24-JUL-2018
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium
            str. LT2 flagellar protein protein.
ACCESSION   AE006468-363
PROTEIN_ID  AAL19327.1
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4857450)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (bases 1 to 4857450)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
REFERENCE   3  (bases 1 to 4857450)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
COMMENT     On Jan 13, 2016 this sequence version replaced AE006468.1.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
FEATURES             Qualifiers
     source          2776826..2844430,2879238..4857450)
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /mol_type="genomic DNA"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     source          /organism="Salmonella phage Fels-1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:128975"
     source          /organism="Phage Gifsy-2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:129862"
     source          /organism="Phage Gifsy-1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:129861"
     source          /organism="Salmonella virus Fels2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:194701"
     protein         /gene="yaiU"
                     /locus_tag="STM0373"
                     /note="similar to 3rd module of ATP-binding components of
                     transporters; similar to E. coli putative flagellin
                     structural protein (AAC73477.1); Blastp hit to AAC73477.1
                     (467 aa), 91% identity in aa 1 - 467"
                     /transl_table=11
BEGIN
        1 MHSWKKKLVV SQLALACTLA ITSQANATTY DTWTYYDNPT TALDWNNMDA AGTVDGNYVN
       61 YSGFVYYNNA NGDFDQTFNG DTVNGTISTY YLNHDYNDAT SNELNISNSV IHGSITSMLP
      121 IGYYDRFDTL DHDGYSEYYR FNNGTDTVDG NWYDGDVFTL NIANSTIDDD YEAFYFTDSY
      181 KDGDVTKYTN ETFDVSEGVA VNLDVESNIN ISNNSRVAGI ALSQGNTYNN TYTTESHNWD
      241 NNINVFDSTV TSGSDYILDS AYTTDTGTFG TGHFGNSDEP SDYTGAGDVA LSFTDDNGAS
      301 DYAMKNNVYF SNSTLMGDVK FTSNWNANFD ADGDDTNGDG VPDTNHGWAD DGLNVDELNL
      361 TLDNGSKWVG QATYTVDTTS RMYDVETNSL TPGATLEDNA WNRIVGNEVF QSGVFNVTLN
      421 NGSEWDTVGD STVDTLAVNN GSQVNVSNSD LTSDTIDLTN GSSLNIGEGG YVDTDHLTID
      481 SYSTVGLTES TGWSTYSNLY ANTITVTNGG VLDVNVGQFD TEVFSTDKLE LTSGNTADHN
      541 GNVVSGVFNI HSSDYVLNAD LVNDRTWDTT QANYGYGTIA MNSDGHLTIN GNGDINNGDE
      601 LDNSSVDNVV AATGNYKVRI DNATGAGSVA DYKGNELIYV NDVNTDATFS AANKADLGAY
      661 TYQAKQEGNT VVLEQMELTD YANMALSIPS ANTNIWNLEQ DTVGTRLTNA RHGLADNGGA
      721 WVSYFGGNFN GDNGTINYDQ DVNGIMVGVD TKVDGNNAKW IVGAAAGFAK GDLSDRTGQV
      781 DQDSQSAYIY SSARFANNIF VDGNLSYSHF NNDLSANMSD GTYVDGNTSS DAWGFGLKLG
      841 YDLKLGDAGY VTPYGSVSGL FQSGDDYQLS NDMKVDGQSY DSMRYELGVD AGYTFTYSED
      901 QALTPYFKLA YVYDDSNNDA DVNGDSIDNG VEGSAVRVGL GTQFSFTKNF SAYTDANYLG
      961 GGDVDQDWSA NVGVKYTW
//