LOCUS AAC05289.1 272 aa PRT ROD 25-JUL-2016 DEFINITION Mus musculus butyrophilin-like protein. ACCESSION AF050157-4 PROTEIN_ID AAC05289.1 SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 245439) AUTHORS Rowen,L., Qin,S., Loretz,C., Mix,L., Lasky,S., Madan,A. and Hood,L. TITLE Sequence of the mouse major histocompatibility class II region JOURNAL Unpublished REFERENCE 2 (bases 1 to 245439) AUTHORS Rowen,L. TITLE Direct Submission JOURNAL Submitted (24-FEB-1998) Department of Molecular Biotechnology, Box 357730 University of Washington, Seattle, Washington 98195, USA COMMENT This sequence overlaps BAC 461G2 (GenBank Accession Number AF027865) on the 5' side by 24712 bases. This sequence overlaps BAC 29N7 (GenBank Accession Number AF030001) on the 3' side by 576 bases. Sequencing methodology: high redundancy shotgun. Interspersed repeats were identified with RepeatMasker (available from http://ftp.genome.washingtion.edu/RM/RepeatMasker.html) Simple sequence repeats were identified with sputnik (available from http://www.geospiza.com/people/chrisa/software/sputnik.html). FEATURES Qualifiers source /organism="Mus musculus" /mol_type="genomic DNA" /strain="129" /db_xref="taxon:10090" /chromosome="17" /haplotype="H2-b" /clone_lib="Genome Systems BAC library" source /organism="Mus musculus" /mol_type="genomic DNA" /db_xref="taxon:10090" /clone="BAC 135G15" source /organism="Mus musculus" /mol_type="genomic DNA" /db_xref="taxon:10090" /clone="BAC 416N15" /sub_clone="cosmid 19" /note="BAC 416N15 was subcloned into cosmids" source /organism="Mus musculus" /mol_type="genomic DNA" /db_xref="taxon:10090" /clone="BAC 416N15" /sub_clone="cosmid 15" /note="BAC 416N15 was subcloned into cosmids" protein /gene="NG10" /note="this gene's exons were predicted by Genscan and confirmed by blast x similarities to the butyrophilin family; no ESTs match this sequence;The 3' end could not be identified." intron_pos 27:1 (1/6) intron_pos 145:1 (2/6) intron_pos 239:1 (3/6) intron_pos 246:1 (4/6) intron_pos 255:1 (5/6) intron_pos 264:1 (6/6) BEGIN 1 MKGSPSVPPA GCLLPLLLLL FTGVSGEVSW FSVKGPAEPI TVLLGTEATL PCQLSPEQSA 61 ARMHIRWYRA QPTPAVLVFH NGQEQGEVQM PEYRGRTQMV RQAIDMGSVA LQIQQVQASD 121 DGLYHCQFTD GFTSQEVSME LRVIGLGSAP LVHMTGPEND GIRVLCSSSG WFPKPKVQWR 181 DTSGNMLLSS SELQTQDREG LFQVEVSLLV TDRAIGNVIC SIQNPMYDQE KSKAILLPDD 241 LQADLDRRKA LYKEDWKKAL LYPDWRKELF QE //