LOCUS CAB14883.1 1115 aa PRT BCT 08-FEB-2018
DEFINITION Bacillus subtilis subsp. subtilis str. 168 DNA polymerase
III (alpha subunit), DnaE3 protein.
ACCESSION AL009126-3089
PROTEIN_ID CAB14883.1
SOURCE Bacillus subtilis subsp. subtilis str. 168
ORGANISM Bacillus subtilis subsp. subtilis str. 168
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE 1 (bases 1 to 4215606)
AUTHORS Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G.,
Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S.,
Borriss R., Boursier L., Brans A., Braun M., Brignell S.C.,
Bron S., Brouillet S., Bruschi C.V., Caldwell B., Capuano V.,
Carter N.M., Choi S.K., Codani J.J., Connerton I.F., Cummings N.J.,
Daniel R.A., Denizot F., Devine K.M., Dusterhoft A., Ehrlich S.D.,
Emmerson P.T., Entian K.D., Errington J., Fabret C., Ferrari E.,
Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A.,
Galleron N., Ghim S.Y., Glaser P., Goffeau A., Golightly E.J.,
Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R.,
Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.F.,
Itaya M., Jones L., Joris B., Karamata D., Kasahara Y.,
Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P.,
Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A.,
Lardinois S., Lauber J., Lazarevic V., Lee S.M., Levine A., Liu H.,
Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P.,
Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M.,
Ogawa K., Ogiwara A., Oudega B., Park S.H., Parro V., Pohl T.M.,
Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P.,
Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M.,
Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T.,
Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
Sekowska A., Seror S.J., Serror P., Shin B.S., Soldo B.,
Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K.,
Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A.,
Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A.,
Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T.,
Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K.,
Yoshida K., Yoshikawa H.F., Zumstein E., Yoshikawa H., Danchin A.
TITLE The complete genome sequence of the gram-positive bacterium
Bacillus subtilis
JOURNAL Nature 390(6657), 249-256(1997).
PUBMED 9384377
REFERENCE 2 (bases 1 to 4215606)
AUTHORS Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G.,
Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C.,
Danchin A.
TITLE From a consortium sequence to a unified sequence: the Bacillus
subtilis 168 reference genome a decade later
JOURNAL Microbiology (Reading, Engl.) 155(Pt 6), 1758-1775(2009).
PUBMED 19383706
REFERENCE 3 (bases 1 to 4215606)
AUTHORS Belda E., Sekowska A., Le Fevre F., Mornico D., Morgat A.,
Ouzounis C., Vallenet D., Medigue C., Danchin A.
TITLE An updated metabolic view of the Bacillus subtilis 168 genome
JOURNAL Microbiology (Reading, Engl.) 159(Pt 4), 757-770(2013).
PUBMED 23429746
REFERENCE 4 (bases 1 to 4215606)
AUTHORS Kunst F., Ogasawara N., Yoshikawa H., Danchin A.
JOURNAL Submitted (18-NOV-1997) to the INSDC. I. Moszer, A. Danchin,
Genetique des Genomes Bacteriens, Institut Pasteur, 28 rue du
Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail:
moszer@pasteur.fr, antoine.danchin@normalesup.org Phone: +33 (0)1
45 68 84 41, Fax: +33 (0)1 45 68 89 48
REFERENCE 5 (bases 1 to 4215606)
AUTHORS Genoscope - C.E.A.
CONSRTM Institut Pasteur and Genoscope
JOURNAL Submitted (29-JAN-2009) to the INSDC. Genoscope - Centre National
de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail :
seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
REFERENCE 6 (bases 1 to 4215606)
AUTHORS Genoscope - C.E.A.
CONSRTM AMAbiotics and Genoscope
JOURNAL Submitted (24-JAN-2013) to the INSDC. A. Danchin, AMAbiotics, Bldg
G1, 2, rue Gaston Cremieux, 91000 EVRY
antoine.danchin@normalesup.org Bldg G1 Genoscope / CEA
(Commissariat a l'energie atomique et aux energies alternatives):
BP 191 91006 EVRY cedex - FRANCE (E-mail: seqref@genoscope.cns.fr -
Web: www.genoscope.cns.fr)
REFERENCE 8
AUTHORS Borriss R., Danchin A., Harwood C.R., Medigue C., Rocha E.P.C.,
Sekowska A., Vallenet D.
TITLE Bacillus subtilis, the model Gram-positive bacterium: 20 years of
annotation refinement
JOURNAL Microb Biotechnol 11(1), 3-17(2018).
PUBMED 29280348
COMMENT On or before Mar 17, 2009 this sequence version replaced
gi:32468687, gi:32468690, gi:32468695, gi:32468704, gi:32468715,
gi:32468723, gi:32468738, gi:32468743, gi:32468745, gi:32468758,
gi:32468767, gi:32468778, gi:32468787, gi:32468796, gi:32468802,
gi:32468809, gi:32468813, gi:32468825, gi:32468830, gi:32468833,
gi:32468840, gi:38680335.
Annotation results relative to BLAST similarities, COG
assignations, enzymatic function prediction (PRIAM software), TMHMM
and SignalP predictions, and synteny conservation (Syntonizer
software) are available in the MicroScope annotation platform
http://www.genoscope.cns.fr/agc/microscope.
The large cluster comprising the i, h and g rDNA regions could not
be properly resolved, we therefore incorporated the original
sequence of rRNAihg in the final assembly.
FEATURES Qualifiers
source /organism="Bacillus subtilis subsp. subtilis str. 168"
/sub_species="subtilis"
/strain="168"
/mol_type="genomic DNA"
/db_xref="taxon:224308"
protein /transl_table=11
/gene="dnaEC"
/locus_tag="BSU_29230"
/old_locus_tag="BSU29230"
/function="16.9: Replicate"
/note="Evidence 1a: Function from experimental evidences
in the studied strain; PubMedId: 9799485, 9822387,
10354411, 14593098, 20122408, 22333191, 24106089,
29078353; Product type e: enzyme"
/db_xref="EnsemblGenomes-Gn:BSU29230"
/db_xref="EnsemblGenomes-Tr:CAB14883"
/db_xref="GOA:O34623"
/db_xref="InterPro:IPR003141"
/db_xref="InterPro:IPR004013"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004805"
/db_xref="InterPro:IPR011708"
/db_xref="InterPro:IPR016195"
/db_xref="InterPro:IPR029460"
/db_xref="InterPro:IPR040982"
/db_xref="InterPro:IPR041931"
/db_xref="SubtiList:BG12583"
/db_xref="UniProtKB/Swiss-Prot:O34623"
/experiment="publication(s) with functional evidences,
PMID:9799485, 9822387, 10354411, 14593098, 20122408,
22333191, 24106089, 29078353"
BEGIN
1 MSFVHLQVHS GYSLLNSAAA VEELVSEADR LGYASLALTD DHVMYGAIQF YKACKARGIN
61 PIIGLTASVF TDDSELEAYP LVLLAKSNTG YQNLLKISSV LQSKSKGGLK PKWLHSYREG
121 IIAITPGEKG YIETLLEGGL FEQAAQASLE FQSIFGKGAF YFSYQPFKGN QVLSEQILKL
181 SEETGIPVTA TGDVHYIRKE DKAAYRCLKA IKAGEKLTDA PAEDLPDLDL KPLEEMQNIY
241 REHPEALQAS VEIAEQCRVD VSLGQTRLPS FPTPDGTSAD DYLTDICMEG LRSRFGKPDE
301 RYLRRLQYEL DVIKRMKFSD YFLIVWDFMK HAHEKGIVTG PGRGSAAGSL VAYVLYITDV
361 DPIKHHLLFE RFLNPERVSM PDIDIDFPDT RRDEVIQYVQ QKYGAMHVAQ IITFGTLAAK
421 AALRDVGRVF GVSPKEADQL AKLIPSRPGM TLDEARQQSP QLDKRLRESS LLQQVYSIAR
481 KIEGLPRHAS THAAGVVLSE EPLTDVVPLQ EGHEGIYLTQ YAMDHLEDLG LLKMDFLGLR
541 NLTLIESITS MIEKEENIKI DLSSISYSDD KTFSLLSKGD TTGIFQLESA GMRSVLKRLK
601 PSGLEDIVAV NALYRPGPME NIPLFIDRKH GRAPVHYPHE DLRSILEDTY GVIVYQEQIM
661 MIASRMAGFS LGEADLLRRA VSKKKKEILD RERSHFVEGC LKKEYSVDTA NEVYDLIVKF
721 ANYGFNRSHA VAYSMIGCQL AYLKAHYPLY FMCGLLTSVI GNEDKISQYL YEAKGSGIRI
781 LPPSVNKSSF PFTVENGSVR YSLRAIKSVG VSAVKDIYKA RKEKPFEDLF DFCFRVPSKS
841 VNRKMLEALI FSGAMDEFGQ NRATLLASID VALEHAELFA ADDDQMGLFL DESFSIKPKY
901 VETEELPLVD LLAFEKETLG IYFSNHPLSA FRKQLTAQGA VSILQAQRAV KRQLSLGVLL
961 SKIKTIRTKT GQNMAFLTLS DETGEMEAVV FPEQFRQLSP VLREGALLFT AGKCEVRQDK
1021 IQFIMSRAEL LEDMDAEKAP SVYIKIESSQ HSQEILAKIK RILLEHKGET GVYLYYERQK
1081 QTIKLPESFH INADHQVLYR LKELLGQKNV VLKQW
//