LOCUS CAB11883.2 1193 aa PRT BCT 08-FEB-2018
DEFINITION Bacillus subtilis subsp. subtilis str. 168 RNA polymerase
(beta subunit) protein.
ACCESSION AL009126-107
PROTEIN_ID CAB11883.2
SOURCE Bacillus subtilis subsp. subtilis str. 168
ORGANISM Bacillus subtilis subsp. subtilis str. 168
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE 1 (bases 1 to 4215606)
AUTHORS Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G.,
Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S.,
Borriss R., Boursier L., Brans A., Braun M., Brignell S.C.,
Bron S., Brouillet S., Bruschi C.V., Caldwell B., Capuano V.,
Carter N.M., Choi S.K., Codani J.J., Connerton I.F., Cummings N.J.,
Daniel R.A., Denizot F., Devine K.M., Dusterhoft A., Ehrlich S.D.,
Emmerson P.T., Entian K.D., Errington J., Fabret C., Ferrari E.,
Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A.,
Galleron N., Ghim S.Y., Glaser P., Goffeau A., Golightly E.J.,
Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R.,
Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.F.,
Itaya M., Jones L., Joris B., Karamata D., Kasahara Y.,
Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P.,
Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A.,
Lardinois S., Lauber J., Lazarevic V., Lee S.M., Levine A., Liu H.,
Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P.,
Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M.,
Ogawa K., Ogiwara A., Oudega B., Park S.H., Parro V., Pohl T.M.,
Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P.,
Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M.,
Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T.,
Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
Sekowska A., Seror S.J., Serror P., Shin B.S., Soldo B.,
Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K.,
Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A.,
Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A.,
Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T.,
Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K.,
Yoshida K., Yoshikawa H.F., Zumstein E., Yoshikawa H., Danchin A.
TITLE The complete genome sequence of the gram-positive bacterium
Bacillus subtilis
JOURNAL Nature 390(6657), 249-256(1997).
PUBMED 9384377
REFERENCE 2 (bases 1 to 4215606)
AUTHORS Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G.,
Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C.,
Danchin A.
TITLE From a consortium sequence to a unified sequence: the Bacillus
subtilis 168 reference genome a decade later
JOURNAL Microbiology (Reading, Engl.) 155(Pt 6), 1758-1775(2009).
PUBMED 19383706
REFERENCE 3 (bases 1 to 4215606)
AUTHORS Belda E., Sekowska A., Le Fevre F., Mornico D., Morgat A.,
Ouzounis C., Vallenet D., Medigue C., Danchin A.
TITLE An updated metabolic view of the Bacillus subtilis 168 genome
JOURNAL Microbiology (Reading, Engl.) 159(Pt 4), 757-770(2013).
PUBMED 23429746
REFERENCE 4 (bases 1 to 4215606)
AUTHORS Kunst F., Ogasawara N., Yoshikawa H., Danchin A.
JOURNAL Submitted (18-NOV-1997) to the INSDC. I. Moszer, A. Danchin,
Genetique des Genomes Bacteriens, Institut Pasteur, 28 rue du
Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail:
moszer@pasteur.fr, antoine.danchin@normalesup.org Phone: +33 (0)1
45 68 84 41, Fax: +33 (0)1 45 68 89 48
REFERENCE 5 (bases 1 to 4215606)
AUTHORS Genoscope - C.E.A.
CONSRTM Institut Pasteur and Genoscope
JOURNAL Submitted (29-JAN-2009) to the INSDC. Genoscope - Centre National
de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail :
seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr)
REFERENCE 6 (bases 1 to 4215606)
AUTHORS Genoscope - C.E.A.
CONSRTM AMAbiotics and Genoscope
JOURNAL Submitted (24-JAN-2013) to the INSDC. A. Danchin, AMAbiotics, Bldg
G1, 2, rue Gaston Cremieux, 91000 EVRY
antoine.danchin@normalesup.org Bldg G1 Genoscope / CEA
(Commissariat a l'energie atomique et aux energies alternatives):
BP 191 91006 EVRY cedex - FRANCE (E-mail: seqref@genoscope.cns.fr -
Web: www.genoscope.cns.fr)
REFERENCE 8
AUTHORS Borriss R., Danchin A., Harwood C.R., Medigue C., Rocha E.P.C.,
Sekowska A., Vallenet D.
TITLE Bacillus subtilis, the model Gram-positive bacterium: 20 years of
annotation refinement
JOURNAL Microb Biotechnol 11(1), 3-17(2018).
PUBMED 29280348
COMMENT On or before Mar 17, 2009 this sequence version replaced
gi:32468687, gi:32468690, gi:32468695, gi:32468704, gi:32468715,
gi:32468723, gi:32468738, gi:32468743, gi:32468745, gi:32468758,
gi:32468767, gi:32468778, gi:32468787, gi:32468796, gi:32468802,
gi:32468809, gi:32468813, gi:32468825, gi:32468830, gi:32468833,
gi:32468840, gi:38680335.
Annotation results relative to BLAST similarities, COG
assignations, enzymatic function prediction (PRIAM software), TMHMM
and SignalP predictions, and synteny conservation (Syntonizer
software) are available in the MicroScope annotation platform
http://www.genoscope.cns.fr/agc/microscope.
The large cluster comprising the i, h and g rDNA regions could not
be properly resolved, we therefore incorporated the original
sequence of rRNAihg in the final assembly.
FEATURES Qualifiers
source /organism="Bacillus subtilis subsp. subtilis str. 168"
/sub_species="subtilis"
/strain="168"
/mol_type="genomic DNA"
/db_xref="taxon:224308"
protein /transl_table=11
/gene="rpoB"
/locus_tag="BSU_01070"
/old_locus_tag="BSU01070"
/function="16.2: Construct biomass (Anabolism)"
/EC_number="2.7.7.6"
/note="Evidence 1a: Function from experimental evidences
in the studied strain; PubMedId: 10049799, 10744988,
12455702, 12682299, 15060052, 28163698; Product type e :
enzyme"
/db_xref="EnsemblGenomes-Gn:BSU01070"
/db_xref="EnsemblGenomes-Tr:CAB11883"
/db_xref="GOA:P37870"
/db_xref="InterPro:IPR007120"
/db_xref="InterPro:IPR007121"
/db_xref="InterPro:IPR007641"
/db_xref="InterPro:IPR007642"
/db_xref="InterPro:IPR007644"
/db_xref="InterPro:IPR007645"
/db_xref="InterPro:IPR010243"
/db_xref="InterPro:IPR014724"
/db_xref="InterPro:IPR015712"
/db_xref="InterPro:IPR019462"
/db_xref="InterPro:IPR037033"
/db_xref="InterPro:IPR037034"
/db_xref="InterPro:IPR042107"
/db_xref="PDB:2LY7"
/db_xref="SubtiList:BG10728"
/db_xref="UniProtKB/Swiss-Prot:P37870"
/experiment="publication(s) with functional evidences,
PMID:10049799, 10744988, 12455702, 12682299, 15060052,
28163698"
BEGIN
1 MTGQLVQYGR HRQRRSYARI SEVLELPNLI EIQTSSYQWF LDEGLREMFQ DISPIEDFTG
61 NLSLEFIDYS LGEPKYPVEE SKERDVTYSA PLRVKVRLIN KETGEVKDQD VFMGDFPIMT
121 DTGTFIINGA ERVIVSQLVR SPSVYFSGKV DKNGKKGFTA TVIPNRGAWL EYETDAKDVV
181 YVRIDRTRKL PVTVLLRALG FGSDQEILDL IGENEYLRNT LDKDNTENSD KALLEIYERL
241 RPGEPPTVEN AKSLLDSRFF DPKRYDLANV GRYKINKKLH IKNRLFNQRL AETLVDPETG
301 EILAEKGQIL DRRTLDKVLP YLENGIGFRK LYPNGGVVED EVTLQSIKIF APTDQEGEQV
361 INVIGNAYIE EEIKNITPAD IISSISYFFN LLHGVGDTDD IDHLGNRRLR SVGELLQNQF
421 RIGLSRMERV VRERMSIQDT NTITPQQLIN IRPVIASIKE FFGSSQLSQF MDQTNPLAEL
481 THKRRLSALG PGGLTRERAG MEVRDVHYSH YGRMCPIETP EGPNIGLINS LSSYAKVNRF
541 GFIETPYRRV DPETGKVTGR IDYLTADEED NYVVAQANAR LDDEGAFIDD SIVARFRGEN
601 TVVSRNRVDY MDVSPKQVVS AATACIPFLE NDDSNRALMG ANMQRQAVPL MQPEAPFVGT
661 GMEYVSGKDS GAAVICKHPG IVERVEAKNV WVRRYEEVDG QKVKGNLDKY SLLKFVRSNQ
721 GTCYNQRPIV SVGDEVVKGE ILADGPSMEL GELALGRNVM VGFMTWDGYN YEDAIIMSER
781 LVKDDVYTSI HIEEYESEAR DTKLGPEEIT RDIPNVGEDA LRNLDDRGII RIGAEVKDGD
841 LLVGKVTPKG VTELTAEERL LHAIFGEKAR EVRDTSLRVP HGGGGIIHDV KVFNREDGDE
901 LPPGVNQLVR VYIVQKRKIS EGDKMAGRHG NKGVISKILP EEDMPYLPDG TPIDIMLNPL
961 GVPSRMNIGQ VLELHMGMAA RYLGIHIASP VFDGAREEDV WETLEEAGMS RDAKTVLYDG
1021 RTGEPFDNRV SVGIMYMIKL AHMVDDKLHA RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV
1081 WALEAYGAAY TLQEILTVKS DDVVGRVKTY EAIVKGDNVP EPGVPESFKV LIKELQSLGM
1141 DVKILSGDEE EIEMRDLEDE EDAKQADGLA LSGDEEPEET ASADVERDVV TKE
//