LOCUS       CAB05117.2               616 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Proline dehydrogenase 1, mitochondrial
            protein.
ACCESSION   BX284604-4690
PROTEIN_ID  CAB05117.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17493829)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17493829)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17493829)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="IV"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="prdh-1"
                     /locus_tag="CELE_B0513.5"
                     /standard_name="B0513.5a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00007197"
                     /db_xref="EnsemblGenomes-Tr:B0513.5a"
                     /db_xref="WormBase:WBGene00007197"
     intron_pos      19:1 (1/8)
     intron_pos      70:0 (2/8)
     intron_pos      178:0 (3/8)
     intron_pos      212:2 (4/8)
     intron_pos      298:0 (5/8)
     intron_pos      411:2 (6/8)
     intron_pos      480:0 (7/8)
     intron_pos      547:0 (8/8)
BEGIN
        1 MQAALIGLNF PLQRRFLSGV LTTTSSAKRC YSGDTGKPYD CTSAEHKKEL EECYNRLDLS
       61 FENTKEAFKS KSNTELVRAL VVLRLCGIQT LVNQNQIILN TMRRVLGKNL FKKTLKNTFF
      121 GHFVAGETEE EVRHVVEKLR NYGVKSILDY SVEADITSQE ATDKTVKGTS VATVKPAAMT
      181 PVVDAKTLET TRERYTVHEE FGDRRQGVSS ARTYFYEGEE QCDKNRDIFK DSINAVASAT
      241 KNEGFVAVKI TALGRPQLLL KLSEAIVQTQ NFFKALTGGM SLQEGRLTSQ EFYKRLGELG
      301 VKTDTESVKK FFDEVDFDSD GIVDLHGWNH ILDDHVKLGQ LFQVLNIKTG SLEPLIQNLS
      361 NEEEQEFRNM VRRTLDVAEY AIEKGVRIMV DAEQTYLQPA ISKITIEMMK KYNKGRGNIF
      421 NTYQAYLKGT LQNMEADMQV ARREGWHFGA KLVRGAYMEQ ERARAKAIGY EDPINDNFEA
      481 TSKMYESCLT RIADEVHRRG KTNVSVMVAS HNEDTVRFAL NLMKEKCISP SERVMCMAQL
      541 YGMCDQVSFS LGQAGFSVYK YLPYGPVEEV LPYLSRRALE NGSVLKKANK ERDLLWKELK
      601 RRISSGEFKA RSSSSS
//