LOCUS CAA88699.2 1378 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans C2H2-type domain-containing protein protein. ACCESSION BX284602-3655 PROTEIN_ID CAA88699.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 15279421) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="II" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="F33H1.4" /locus_tag="CELE_F33H1.4" /standard_name="F33H1.4" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00009365" /db_xref="EnsemblGenomes-Tr:F33H1.4" /db_xref="UniProtKB/TrEMBL:Q19991" /db_xref="WormBase:WBGene00009365" intron_pos 10:1 (1/6) intron_pos 81:2 (2/6) intron_pos 692:1 (3/6) intron_pos 1015:0 (4/6) intron_pos 1324:0 (5/6) intron_pos 1344:0 (6/6) BEGIN 1 MTGRGHSLKG VAHSNPDSSS DSRRGRGRGT RRSQLPTTSH ADEQSEEHEF REDEDPEFLN 61 EDHEDDTLVE GDDRSDMDKI KQIQQQKMMI VTPMAQKRTR GRPPRQRTSS QAQMPDDLMD 121 EELMSQDLLE SGPLEGPGSS DRKPAPPVLV GRGSRARNAP KKLNDFVQHH QLANKKMQIQ 181 EISIPLPLAP NAGIEDNIEP LIPNDAHIEE VRHEVVEKDV VKSVIERDRD EDQEQEHASV 241 ADPAGPPPAP AHLANKANSR GRPANPIPPH RRPVPKDLVP PGFPSLKRAS SQRDPTPIKR 301 KDTREVAEKV QESHRDPEPN DAPPSPLSMS EVPIAAHQVE IEDEVVQSGS PIDIVTEVES 361 NDGPPPMPPM LLQQQSSQAS SSTVPSASQG VTVPSTALDA TKKKEREAGK DLPSEHFPKE 421 KARHVSTRGL HPYVSDKSHI YDVRDQVLIH PEDMEQQEQD AIAQQRVLTL QGGNFIEDRI 481 GRSDLMEDEE MKMMKSIQPQ QYIVEENGMN VVYEVDPNSV IEEEEQVEIQ AAEQQAEQYV 541 MDEHSKQGEM EDEEDDDLPP QLVPEGVPED AVGDDERDEQ SQEKGLAVDE DGNFDFNMMD 601 EGEMIRLQSP GGRAHEVRFA RDVHGNSVFI DENGHIVELV TDTGALVEPH NMVEQEQQVM 661 QEEVEQEDVK NKQQIRQHQQ QQQQEVPGGQ EGAGPVDRGN LEFSFLDTNN ICCGLCGEIV 721 VYDKLLTEHL PTAHPEYLSP GVELEEVPYD SWLKTRLKQE SKMMENGFRH YDDHDGGGFG 781 GAVRLYSKGI RQMRKVSQIR VNVNEMTLPQ LEVALKRKLV EKMGRKVPVS LVDRLHARCD 841 ICQAVVSLNK KFEVIHLVRH FNAWHPAEHR CSQDWRDPGS ATTSTSRRPL SLSDFSVVST 901 ESADQNNLQC IWCGMMMDRS ALGMHFSEVH AQQIAVPNCS LCLQEMVMTA RLMEKYGEDF 961 GISLPDEFHL QCSKLNAKYS SEKAMDKAID RHLKRAKPGV DQHDPDDSHE DAEAICTTNS 1021 QQSFGRRNRL KRKFVKPCFR QICPNNSSYF EPKSACEWKC RLCNRNVYGA VISAGAIKHY 1081 KEFHPAETEH MQYELVKARL ERIGDGSMEF VHPQLVECLI CNLTYALHKP FNICRAIRHL 1141 RLKHPEVMPE TAGKPISGAE ISETTDLQTT IRRPNIRFGD TITDPIELER FRKDNFDQQF 1201 DKVQIVFGIK KNNEPAYILL MENEKMDLKM AQEMAGKVQT EEDTSQESRF DRLVGRDETP 1261 QFEESEPSTM FREETKPMAL EFPQQIVEEE VEEMEEVPVE TEFIPTYDAN NPDHVLIDEN 1321 EIMNDGNYEM IQEGEYQEIE EDRTVRYLTE DEIREAQARG EILEFEEGEY VEEYAVQQ //