LOCUS       ACV56759.1               522 aa    PRT              BCT 11-DEC-2013
DEFINITION  Eggerthella lenta DSM 2243 transcriptional regulator,
            LuxR family protein.
ACCESSION   CP001726-2764
PROTEIN_ID  ACV56759.1
SOURCE      Eggerthella lenta DSM 2243
  ORGANISM  Eggerthella lenta DSM 2243
            Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales;
            Eggerthellaceae; Eggerthella.
REFERENCE   1  (bases 1 to 3632260)
  AUTHORS   Saunders,E., Pukall,R., Abt,B., Lapidus,A., Glavina Del Rio,T.,
            Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M.,
            Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K.,
            Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M.,
            Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P., Meincke,L.,
            Sims,D., Brettin,T., Detter,J.C., Goker,M., Bristow,J., Eisen,J.A.,
            Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Han,C.
  TITLE     Complete genome sequence of Eggerthella lenta type strain (IPP VPI
            0255)
  JOURNAL   Stand Genomic Sci 1 (2), 174-182 (2009)
   PUBMED   21304654
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632260)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E.,
            Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Pukall,R., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete genome of Eggerthella lenta DSM 2243
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3632260)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E.,
            Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Pukall,R., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (02-SEP-2009) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4082980
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
                      David Bruce (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Finishing done by JGI-LANL
            Annotation by JGI-ORNL and JGI-PGF
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##Metadata-START##
            Organism Display Name :: Eggerthella lenta VPI 0255, DSM 2243
            Culture Collection ID :: DSM 2243, ATCC 25559, JCM 9979
            GOLD Stamp ID         :: Gc01054
            Funding Program       :: DOE-GEBA 2007
            Number of Reads       :: 39464-Sanger, 471609-454
            Assembly Method       :: Newbler version 1.1.02.15, Phrap
            Sequencing Depth      :: 10.2x Sanger; 25.3x 454
            Gene Calling Method   :: Prodigal
            Isolation Site        :: Rectal tumor
            Collection Date       :: 1938
            Host Name             :: Homo sapiens
            Host Health           :: Patient with rectal tumor
            Body Sample Site      :: Blood
            Oxygen Requirement    :: Anaerobe
            Cell Shape            :: Rod-shaped
            Motility              :: Nonmotile
            Sporulation           :: Nonsporulating
            Temperature Range     :: Mesophile
            Temperature Optimum   :: 37C
            Gram Staining         :: gram+
            Biotic Relationship   :: Free living
            Diseases              :: Bacteremia
            Habitat               :: Blood, Host, Human intestinal microflora
            Phenotypes            :: Pathogen
            ##Metadata-END##
FEATURES             Qualifiers
     source          /organism="Eggerthella lenta DSM 2243"
                     /mol_type="genomic DNA"
                     /strain="DSM 2243"
                     /culture_collection="DSM:2243"
                     /type_material="type strain of Eggerthella lenta"
                     /db_xref="taxon:479437"
     protein         /locus_tag="Elen_2812"
                     /inference="protein motif:PFAM:PF00196"
                     /note="PFAM: regulatory protein LuxR; SMART: regulatory
                     protein LuxR; KEGG: plu:plu4288 hypothetical protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR000792"
BEGIN
        1 MSGAAGDRDV RTVERRNMIR LEKRGIIKRF DLLDTLSFFA FCMSVPLFLP VLEQWRGMTS
       61 SVAVSWSFLP SVSFSAALSL AAMFTALAFL FICLLKTAHA RVSRTIMLLA LACYAIGYGL
      121 LDLWSFGALD GSVVEAGSGL MMGFGAAVMC LVWMSRLHVL EFRRALVVAW VAGCVLFASA
      181 SLLPMLGATP ARTVLTVAAA LSVVGCARLF FRSEGEDERS AQAGVNWRDV FGHLDVSVVE
      241 GTGDFKTPLA RALFFAVMPF AMLLLFVADN SLVRTMDWGV APLALAGVLA VAVMVPLIRM
      301 KTDQALINFS YRFFLPLVAF AVFAATAFVE PPLQRSVMAV GSLSFCAIYA LVMSAMLVAM
      361 AGRMRSLALP AGGIMIIVGC LVCLLSDANM NTGVLAACQY QVLIVLFVVM AIALMVTPSS
      421 RLWRVMLEGI DAVESNALGA QEGYNRRCAD LSDEYRLTAR EAEILLLLGR GHTSSFVADE
      481 LTVAESTVRS HRKNIYRKLG VSSREELFKL LDDEGDGPDK GV
//