LOCUS ACV56106.1 1180 aa PRT BCT 11-DEC-2013 DEFINITION Eggerthella lenta DSM 2243 pyruvate ferredoxin/flavodoxin oxidoreductase protein. ACCESSION CP001726-2111 PROTEIN_ID ACV56106.1 SOURCE Eggerthella lenta DSM 2243 ORGANISM Eggerthella lenta DSM 2243 Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella. REFERENCE 1 (bases 1 to 3632260) AUTHORS Saunders,E., Pukall,R., Abt,B., Lapidus,A., Glavina Del Rio,T., Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D., Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P., Meincke,L., Sims,D., Brettin,T., Detter,J.C., Goker,M., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P. and Han,C. TITLE Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255) JOURNAL Stand Genomic Sci 1 (2), 174-182 (2009) PUBMED 21304654 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE The complete genome of Eggerthella lenta DSM 2243 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3632260) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G., Saunders,E., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D., Pukall,R., Klenk,H.-P. and Eisen,J.A. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (02-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4082980 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Eggerthella lenta VPI 0255, DSM 2243 Culture Collection ID :: DSM 2243, ATCC 25559, JCM 9979 GOLD Stamp ID :: Gc01054 Funding Program :: DOE-GEBA 2007 Number of Reads :: 39464-Sanger, 471609-454 Assembly Method :: Newbler version 1.1.02.15, Phrap Sequencing Depth :: 10.2x Sanger; 25.3x 454 Gene Calling Method :: Prodigal Isolation Site :: Rectal tumor Collection Date :: 1938 Host Name :: Homo sapiens Host Health :: Patient with rectal tumor Body Sample Site :: Blood Oxygen Requirement :: Anaerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: Bacteremia Habitat :: Blood, Host, Human intestinal microflora Phenotypes :: Pathogen ##Metadata-END## FEATURES Qualifiers source /organism="Eggerthella lenta DSM 2243" /mol_type="genomic DNA" /strain="DSM 2243" /culture_collection="DSM:2243" /type_material="type strain of Eggerthella lenta" /db_xref="taxon:479437" protein /locus_tag="Elen_2143" /inference="protein motif:TFAM:TIGR02176" /note="TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2957 pyruvate-flavodoxin oxidoreductase" /transl_table=11 /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR002869" /db_xref="InterPro:IPR002880" /db_xref="InterPro:IPR011895" /db_xref="InterPro:IPR017900" BEGIN 1 MTREFKSMDG NNAAAYVSYA FTEVAGIYPI TPSSPMADLV DQWSAAGKKN IFGTTVKVCE 61 MQSEGGAAGA VHGSLAAGAL TTTYTASQGL LLMIPNMYKM AAEQLPCVFH VSARTLATQA 121 LSIFGDHSDV MACRQTGFAM LAETNVQEVM DLSAVAHLSA IKGRIPFINF FDGFRTSHEV 181 QKIAVWDYED LADMCDMEAV SEFREHALNP ERPAMRGSHE NGDIFFQHRE ACNGVYDALP 241 AIVEDYMHQV NAKLGTNYEL FNYYGAPDAD RVIVAMGSFC DVVEEVVDYL NAQGQKVGLV 301 KVRLYRPFVS EKFMAALPAT VQKIAVMDRT KEPGALGEPL YMDVINALAH EGRADLTVVG 361 GRYGLASKDT PPSSVFAIYQ ELEKDAPARE FTVGIVDDVT NLSLPEDPNS PNTAAEGTIE 421 CKFWGLGGDG TVGANKNSIK IIGDHTDKYV QAYFQYDSKK TGGVTISHLR FGDSPIRSTY 481 YVNKADFVAC HNPSYVTKGF RMVNDVKPGG AFMINCQWTP EELEHHLNAE AKRYIANNDI 541 KLYTINAIDL AAEIGMGKRT NTILQSAFFT LANVIPQDEA LQYMKDAATK SYMKKGQDVV 601 DMNHRAIDAG ATAFVQVEVP ASWANAVDEN EAPTLEGRAE VVKMVREIME PVGRMDGDRL 661 PVSAFVDHAD GQFEQGAAAY EKRGVAVSVP AWDAATCIQC NQCAFACPHA TIRPFALTEE 721 EAAAAPAATV MVPAKGKAAA GLQYTLAISP FDCMGCGVCV NVCPSDSLAM VSTESQLAQQ 781 DVFDYCVDNV SDKPALEDAT VKGSQFKQPL LEFSGACAGC AETAYAKLVT QLFGDRMYVA 841 NATGCSSIWG GPAATSPYTV NAEGRGPAWS NSLFEDNAEH GLGMLLGHEA VRDRLVGKLE 901 AMAANDKTPA ETKDLIAAYL DTMADGEANA KAVEALVPAL EAAVENGCPE APEILQNKEY 961 LNKKSVWIFG GDGWAYDIGY GGLDHVLASG EDVNVFVFDT EVYSNTGGQA SKATNIGQVA 1021 QFAAAGKDVK KKSLTEIAMA YGYVYVAQVA MGAKPAQTIK AIAEAEAYPG PSLIIGYSPC 1081 EMHSIKGGMA NCQDEMKKAV DCGYWNLFRF NPAAEPGKKF TLDSKEPAGG YQEFLMNEAR 1141 YSRLTREFPE RASELFERNE KAAMDRYEHL LKLKDVYAEA //