LOCUS ABO50722.1 800 aa PRT BCT 28-JAN-2014
DEFINITION Desulforamulus reducens MI-1 methionine synthase (B12-
dependent) protein.
ACCESSION CP000612-2170
PROTEIN_ID ABO50722.1
SOURCE Desulforamulus reducens MI-1
ORGANISM Desulforamulus reducens MI-1
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
Desulforamulus.
REFERENCE 1 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Desulfotomaculum reducens MI-1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000266
Source DNA and bacteria available from Bradley M. Tebo
(tebo@ebs.ogi.edu)
Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Desulforamulus reducens MI-1"
/mol_type="genomic DNA"
/strain="MI-1"
/type_material="type strain of Desulfotomaculum reducens"
/db_xref="taxon:349161"
protein /locus_tag="Dred_2207"
/EC_number="2.1.1.13"
/note="PFAM: dihydropteroate synthase, DHPS; homocysteine
S-methyltransferase; Methionine synthase, B12-binding
module, cap domain protein; cobalamin B12-binding domain
protein; KEGG: pca:Pcar_2722
5-methyltetrahydrofolate-homocysteine methyltransferase,
truncation"
/transl_table=11
/db_xref="InterPro:IPR000489"
/db_xref="InterPro:IPR003726"
/db_xref="InterPro:IPR003759"
/db_xref="InterPro:IPR006158"
BEGIN
1 MSFRKRVKKE VLIIDGAMGT LLQQRGLPGG WCPEEWNLSH PEAVKEIHKL YLEAGADIIT
61 TNTFGAIQLK LADYHLGDQV KEINQAAVKL AKEVAQPYGA MVAGSVGPLG KFLQPLGTMT
121 FEEAYQQFYE QCAAMVEAGV DLILFETFGD IGEMRAALIA AADAGDVPVV ASFTFDETGR
181 TFTGTDPETA AVVAERLGIA AIGVNCSVGP RQLEGVVRKL TESTNLPVLV SPNAGMPEII
241 GGKTVFRETP EIMAEYAQRF VDYGASILGG CCGTTPKHIQ AIYQQVKKLK PKCRNKRFGL
301 RVASRVKTVT IQPSGVPVAI GERLNPTGKK ALQAEIREGK TEITRRDALT QVQAGAEILD
361 VNVGVGGVDQ VAAMERAVQA VQVLVEAPLC IDSTDPTVIE HALKLYHGKA LINSVNGEEN
421 SIETILPLAK RYGAALIGLT LDDEGIPPTA AGRLAVARRL VERTEAMGIP RDDLMMDCLV
481 LTVSAQPEGV PETLEAIRLV KQKLQITTSL GVSNVSFGLP NRVLINAAFF AMALNAGLDA
541 AILNPQDQRM METLRASAVL TGRDVRAEKY IAIEQQTHNG SKMETTGEQM KASTPLDILY
601 QAVLSGDKDN IVSYINEALK TGLSPMELLD KALIPGIEEV GRRYGAGIYF LPQLMMAGET
661 MTKSFERLRP ELAKGPAKKA GTVVLATVKG DIHDIGKNIV SVMLANHGFE VIDLGKNVAN
721 EEILRVAAEQ KANIIGLSAL MTTTMVHMQE IIKLVKEQGL NCKVMVGGAA VTEHYAREIG
781 ADGYAIDAVE AVNVAKKLAS
//