LOCUS ABO50472.1 310 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 tRNA pseudouridine synthase B protein. ACCESSION CP000612-1920 PROTEIN_ID ABO50472.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1954" /EC_number="4.2.1.70" /note="KEGG: sth:STH1525 tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein" /transl_table=11 /db_xref="InterPro:IPR002501" /db_xref="InterPro:IPR004510" BEGIN 1 MDGVINILKP PGMTSHDVVF FVRRVTGVKK CGHTGTLDPG ASGVLPVCVG KATRLARFVT 61 DGDKTYRAEI TLGIETSSQD AFGNVISRID ASAIKLDDFS SELRKFQGEI KQTPPMASAI 121 KVKGKKLYEL EREGIIVDVP TRTVTIYQVN IVDSWDWGTP NPRVLFDVAC SKGTYVRTLC 181 SDIGKELGCG AYMSFLLRSR VAAFGLHNAY TLEEIAALAD KSQLESAVIP MAKAVQHLPI 241 VEIHPSAQKS VCSGATLYPA GVRVGLEYLK PEGLVQVQLN HELLGIYKPV LDVNDFGERI 301 ILRPEVVFAS //