LOCUS       ABO49880.1               947 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 diguanylate cyclase/phosphodiesterase
            with PAS/PAC and GAF sensor(s) protein.
ACCESSION   CP000612-1328
PROTEIN_ID  ABO49880.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_1346"
                     /note="KEGG: gme:Gmet_0957 diguanylate
                     cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF
                     sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase;
                     PFAM: GGDEF domain containing protein; EAL domain protein;
                     GAF domain protein; PAS fold-4 domain protein; PAS fold
                     domain protein; SMART: PAS domain containing protein; PAC
                     repeat-containing protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR000014"
                     /db_xref="InterPro:IPR000160"
                     /db_xref="InterPro:IPR000700"
                     /db_xref="InterPro:IPR001610"
                     /db_xref="InterPro:IPR001633"
                     /db_xref="InterPro:IPR003018"
                     /db_xref="InterPro:IPR013656"
                     /db_xref="InterPro:IPR013767"
BEGIN
        1 MISSTRHLFF PFNKFTVLDF GNHYFIQQLP QKCNDKKNCL MQEENKITTE VSSLENLKQE
       61 EQGLKDYIDN LITLNAKLST DGTVLLINET ALRTFHMQPE EVVGKKLWDT PWWSYDADLH
      121 TQLKNAVKQA ATGQTIYYET INHLVSGKKI YIYFTLNPVL NKNNEVIYLV AEGRDITKRK
      181 MIEQDLISTN QELVAANEEL ISIEEELRIS NKEIYLAHER LNNILESITD AFYAVNHQWE
      241 VTYVNTEAEK LLHKKRLDII GKNIWQEFSE MVHTKFYHIL HQVMSEQIYQ QFEYFFQPTG
      301 KWFNIHAYPS SDGLSIYFHD ITEYKLVQEK MSLQNQYLSS LHETTLALMN RLNLDELLKA
      361 IVTRSAELSG TDHGFIFLID NNNPSELVLR FGTGTYKQMV GIRLKPGEGM VGTVWQTGEP
      421 LIVKDYSSWP GKSSIFSHIK IHGGIALPLK SEGKINGILG IIYIEKNQNL ESNNLSLLTG
      481 FAQLASIALD NANLYQAAQQ ELAERKRIEE ILRYLAYHDS LTELPNRTLF NDRLSMALNQ
      541 AHRNKNKLAV MFLDLDHFKK VNDTLGHDIG DQLLKGIAQR FSKLLRKGDT IARIGGDEFT
      601 ILLHNITRAE NASIVADKII DTLANPWIIG NHEFHITTSI GIALYPDDGT DAESLLKNAD
      661 AAMYQAKEMG RNNYQFYTPT MNAQTLRRFE LENNLRRALD RKEFVIYYQP QVEIHTGKIV
      721 GVEALIRWQH PQRGMISPAE FIPMAEETGL IIPIGEWILR RACAQNKAWQ DRGFSPMRVT
      781 VNLSARQFLQ PHLPQYISNV LEDTGLGPQW LELEITESLA MKDVAFTEKT LIELRKMGIT
      841 LAIDDFGTGY SSLNYLKRLP IDILKIDRSF IHDLNTESDD VAIISAIITL GHNLKMKVVA
      901 EGVETKEQLM FLRQQQCDLM QGYLFTKPLP VRELEQKYLS NNTKLFC
//