LOCUS ABO49795.1 707 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 ATP-dependent DNA helicase, RecQ-like protein protein. ACCESSION CP000612-1243 PROTEIN_ID ABO49795.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1261" /EC_number="3.6.1.-" /note="KEGG: ctc:CTC02090 ATP-dependent DNA helicase recQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like" /transl_table=11 /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002121" /db_xref="InterPro:IPR004589" /db_xref="InterPro:IPR006293" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" BEGIN 1 MLKKARQILK QYFGYSSFKS GQDKILNNIL QGKDTLGIMP TGGGKSICYQ IPALMFQGTT 61 LVISPLISLM KDQVDALNSL GIAATFINSS LDSDEVEKRI FDSGHGKYKL LYVAPERLES 121 KRFINSIKSL SISMLAVDEA HCVSQWGHDF RPSYLAINTV VKELDKRPVV TAFTATATEE 181 VTQDIVRLLS LKTPKIYVAG FNRENLSFTV IRGENKKDFI SDYLARNKGQ AGVIYAATRK 241 EVDNLEHWLQ RKGYAVGKYH AGLNDDERIR NQEKFIYDDL QIMVATNAFG MGIDKSNVRY 301 VIHYNMPKNM EAYYQEAGRA GRDGEPSQCI LLFSSQDVQI QKFLIEQNQV PVERKVNEYK 361 KLQAMVDYCH TTHCLRGTIL KYFGEENVPK ECGNCSNCND YNELVDRTVE SQKIFSCILR 421 MQEQYGVSLV ANVLKGSQNK KVIQNGFNRL STYGLMKEYT TKEISDLIHI LIAEGYIYLT 481 EGQYPVAKLQ PKAIPVLKGK EKVLQKVRKK ESIKEADNSL YNQLLNLRKE ISQRNNVPPY 541 IVFSDSTLRE MCVHYPTNEI EMLNIKGVGQ VKLEHFGKEF MEVIKKYLKG NVNNKETDQE 601 LLQQSARDKG LPSYVVSLNM FREGFSLQEI ARQRKIKPVT VQDHIIRCGV EGYDIVWDQF 661 IPTEFEELIL QKIEELGTNK LKPIKEELPN TIDYMAIKAV ICKYKLQ //