LOCUS ABO49122.1 494 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 sigma54 specific transcriptional regulator, Fis family protein. ACCESSION CP000612-570 PROTEIN_ID ABO49122.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0580" /note="KEGG: bcz:BCZK0403 transcriptional regulator; probable arginine utilization regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase" /transl_table=11 /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" BEGIN 1 MTKNNLLKSL INFNAAETSC KNVSADYDLV INSLDCLEDC YFSIVDATGK IIFVSKDFEK 61 IDGYKISDIL GKNVLDVYKL GKQNSVHVRS IAEKKVLKNT KLRYTSASGQ PVDLVMDIYP 121 VFSGREVIGS FAISRDTSKI QALTDKVFQL QKALYNQLQR TNNNGTQFCF DDIIGSGEAM 181 QSVINTAKKM ACSESRIMIL GETGTGKELF AQSIHNNSSR AKEPFIAVNC SAIPDTLLES 241 ILFGTNKGAF TGAEDKAGLF EEAKNGTLFL DELNSMSIVL QSKLLRALET NRIRRVGGNK 301 EIPVNPRIIS AMNIDPKEAI ETEKLRSDFY YRLAVITLEC PPLRNRKEDI ITLSWFYINK 361 YNKILGRKIN EISEEVIQIL ENYNWPGNVR ELSHCIEHAM NIVDPTDTSL LVQHLPAFLQ 421 DKILKNNILP ITVPKINDYK QIMLQVEKDL LTQALKRNTG NINQTAKELN LSRQCLYYKL 481 KRLDIDIQHE IYIE //